Gene BBta_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0453 
Symbol 
ID5154515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp453619 
End bp454623 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content61% 
IMG OID640555472 
ProductCbbX-like protein 
Protein accessionYP_001236645 
Protein GI148252060 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID[TIGR02880] probable Rubsico expression protein CbbX 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.127977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGA GCACCGATTC ACGGCTGGAC ACCCACACCG GCGACACGGC CAGGCTGACG 
GTGCCCGTCG ATAAGGATAT CCAACCAACG GCAGAGATCG ACCTCAGAAG GGAGTTCGAA
TCGTCCGGCG TGCACGCTGT GCTCGAGGAA CTTGACCGAT CGCTCATCGG TCTGAAGCCG
GTCAAGCGCC GTATCCGGGA GACAGCCGCG CTTCTCTTAG TCGATCGGGC ACGCAAGAGC
TTCGGACTCG CGCACGAGAC GCCGACCCTG CATATGTCCT TCACCGGAAA TCCTGGAACC
GGCAAAACCA CCGTCGCGCT CAAAATGGCC GATCTGCTTC ACCGGCTCGG CTACATTCGC
AGGGGTCATC TTGTGACGGT GACCCGCGAC GACCTGGTCG GCCAGTATAT CGGTCACACG
GCGCCCAAGA CGAAGGAAGT GCTGAAGAAG GCGATGGGCG GTGTTCTGTT CATTGATGAG
GCGTATTATC TGTACCGTCC GGAGAACGAA CGGGACTATG GTCAGGAGTC CATCGAAATC
CTGCTACAGG TGATGGAGAA CAACCGTGAC GATCTTGTGG TGATCCTCGC GGGCTATGCC
GACCGCATGG ACCGGTTCTT CAACAGCAAT CCAGGCTTCC GCTCGCGGAT CGCGCATCAC
ATCGAGTTCC CAGACTATAC CGACGAGGAG CTGCTGCATA TCGCAACGCT CATGCTGGAC
GCCCAGAACT ACCGCTTCAC GGACGGAGCG CGCGCGGCGA TGGCCGAGTA TATCGCGCTG
CGGCGCGCGC AGCCGCATTT TGCCAACGCG CGCTCGATCC GCAACGCCAT TGATCGTATG
CGGCTGCGTC AAGCCAATCG CCTCTTCGAG AGCGTAGACG GCCCGGTAGG AATCGAGGCG
GTATCCACAA TCGAGGAAAG CGACGTGCGT GCGAGCCGCG TGTTTCGCGG CGGGCTGGAC
AGCGATGTGG CGCGCGAGGA CGGCGGGAAG GAGGACGACA GATGA
 
Protein sequence
MSASTDSRLD THTGDTARLT VPVDKDIQPT AEIDLRREFE SSGVHAVLEE LDRSLIGLKP 
VKRRIRETAA LLLVDRARKS FGLAHETPTL HMSFTGNPGT GKTTVALKMA DLLHRLGYIR
RGHLVTVTRD DLVGQYIGHT APKTKEVLKK AMGGVLFIDE AYYLYRPENE RDYGQESIEI
LLQVMENNRD DLVVILAGYA DRMDRFFNSN PGFRSRIAHH IEFPDYTDEE LLHIATLMLD
AQNYRFTDGA RAAMAEYIAL RRAQPHFANA RSIRNAIDRM RLRQANRLFE SVDGPVGIEA
VSTIEESDVR ASRVFRGGLD SDVAREDGGK EDDR