| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0402 |
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| Symbol | priA |
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| ID | 5155654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 404918 |
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| End bp | 407128 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640555421 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001236595 |
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| Protein GI | 148252010 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.106987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCG CGACCGATCT CTTTCCAGGT GCCCCGAGCA CGGCCGGCGT GGTCGACGTG
CTGGTTCCGG TCGCGCTCGA CCACACTTAT TCCTACCGCG TGCCGCGTGG CATGGCGCTG
AAACCGGGCG ACGTGGTCGG CGTGCCGCTC GGCGCGCGCG AAGTGCTGGC CGTGGTGTGG
GCGGAGAATG CCAATCCCGA TCCGCGGCTG CACAACCGGC TGAAGGATGT CAGCGAGAAG
CTCGACGTGC CGCCGCTCAA GCCGGAGCTG CGTTCGCTGG TCGACTGGGT CGCCAATTAC
ACACTGTCGC CGCGCGGCAT GGTGCTGCGG ATGTGCTTAC GCATGGGCGA GCATCTCGGA
CCGGAGCGGG TGCGGCTCGG CGTCCGCCTG GTCGGGGACG CGCCGAAACG GCTGACGCCG
GCGCGGAGGC GGGTCATCGA GGCGGTCTCG GACGGCCTGC TGCATGGCAA GTCTGACCTC
GTCCGCGAGA TCGGCGTGTC CGGTAGCGTC ATCGACGGCC TTGTCGACGA GGGCACCCTG
ACGGTCGAAG CGATGCCGCG GACGCTCCCG CCGCCTGCCC CTGATCCCGA CTTCGCCCGG
CCGGAGTTCT TCGATGCCCA GCTTGCCGGC GTCGCGGCGA TGCGGACGCT GGCCGCGAAC
GGCACATTCC AGGTGGCGCT GCTCGACGGC GTCACCGGCT CCGGCAAGAC CGAGGTGTAT
TTCGAGGCGG TGGCCGAAAC GATCCGCCGC GGCCGCCAGT CGCTGATCCT GATGCCGGAG
ATCGCGCTGA CCGGCCAGTT TCTCGAGCGC TTCTCGCGGC GCTTCGGCGT CCGCCCGCTG
GAATGGCATT CCGAGCTGAC CCCGCGCACG CGCCAGCGCA ATTGGGCGTC GATCGCCGCC
GGCGAGGCGC CGGTCGTGGT CGGCGCGCGC TCGGCGCTGT TCCTGCCCTA TGCGGATCTG
GGCTTGATCG TCGTCGATGA GGAGCACGAC CAGGCCTACA AGCAGGACGA GGGCGCGCAT
TATCACGCCC GCGACATGGC GGTGGTGCGC GGCCACATCG CCAAGTTTCC GGTGGTGCTG
GCCTCGGCGA CGCCCTCGGT CGAGACCGAG GTCAATGCGC GCAAGGGCCG CTACCAGCGC
GTCGCGTTGC CGTCGCGCTT CGGCGGCCAG CACATGCCGC ATATCGAGGC CATCGATCTC
CGGCGTGAGC CGCCGCCACG CGGCCGCTAC ATCTCGCCGC GGCTGGCGGG CGAGATCCGG
ACCGCAATCG AGCGCGGCGA GCAGGCGCTG CTGTTCCTGA ACCGCCGCGG CTATGCGCCG
CTGACCCTGT GCCGCGCCTG CGGGCATCGC TTCGCCTGCA CCATCTGCGA CGCCTGGCTG
GTGGATCACC GCTTTCGCCA GCGGCTGGTC TGCCACCATT GCGGCTTCTC GATGCCGCGC
CCGCCGACCT GTCCGCATTG CGCCGCCGAG GAATCGCTGG TTGCGGTCGG CCCCGGCGTC
GAACGGCTGC AGGAGGAGGC GGCGGCGCTG TTTCCGGACG CGCGCAGCAT GGTGCTGTCG
AGCGACCTGA TCACCTCGAT CGAGACCATG CGCGCGGAGC TGACCGAGAT CGCGGAAGGC
CGCGTCGACC TGATTATCGG CACCCAGCTC GTCGCCAAGG GCCATAATTT TCCGCGGCTG
AATCTGGTCG GGGTGGTCGA TGCCGATCTC GGCCTCGGCA ATGGCGATCC GCGCGCTGCC
GAGCGCACCT GGCAGCTCCT CAACCAGGTG ATCGGCCGCG CCGGCCGCGA GCAGGGCCGC
GGGCGCGGCT ATCTGCAGAC CCACCAGCCC GAGCATCCCG TCATGAAGGC GCTGGTCGCC
TGCGATCGCG AGGCCTTCTA CACCAGCGAG ATCGAGGCCC GCGAGCGCAC CGGCTATCCG
CCGTTCGGCC GGCTGGGGAG CCTGATCATC TCGGCGGGCG ACCGGCCGAC CGCGGAGGGC
TTCGCGCGCC GGCTGGTAGC GTCAGCGCCG CGTGAGGAGG GCGTACTGCT GCTCGGCCCG
GCCGAAGCCC CGCTCGCCGT CATCAAGGGC CGCTACCGCT TCCGGCTGCT CCTCAAATCG
GCCCGTAATT TCGATCTGTC GGACTATCTG CGCCACTGGC TGGCGCATGC CGAGAAGCCC
AAGGGCAATC TCAAGCTCGA GGTCGACGTC GACCCCCAAA GCTTCTTGTA A
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| Protein sequence | MDRATDLFPG APSTAGVVDV LVPVALDHTY SYRVPRGMAL KPGDVVGVPL GAREVLAVVW
AENANPDPRL HNRLKDVSEK LDVPPLKPEL RSLVDWVANY TLSPRGMVLR MCLRMGEHLG
PERVRLGVRL VGDAPKRLTP ARRRVIEAVS DGLLHGKSDL VREIGVSGSV IDGLVDEGTL
TVEAMPRTLP PPAPDPDFAR PEFFDAQLAG VAAMRTLAAN GTFQVALLDG VTGSGKTEVY
FEAVAETIRR GRQSLILMPE IALTGQFLER FSRRFGVRPL EWHSELTPRT RQRNWASIAA
GEAPVVVGAR SALFLPYADL GLIVVDEEHD QAYKQDEGAH YHARDMAVVR GHIAKFPVVL
ASATPSVETE VNARKGRYQR VALPSRFGGQ HMPHIEAIDL RREPPPRGRY ISPRLAGEIR
TAIERGEQAL LFLNRRGYAP LTLCRACGHR FACTICDAWL VDHRFRQRLV CHHCGFSMPR
PPTCPHCAAE ESLVAVGPGV ERLQEEAAAL FPDARSMVLS SDLITSIETM RAELTEIAEG
RVDLIIGTQL VAKGHNFPRL NLVGVVDADL GLGNGDPRAA ERTWQLLNQV IGRAGREQGR
GRGYLQTHQP EHPVMKALVA CDREAFYTSE IEARERTGYP PFGRLGSLII SAGDRPTAEG
FARRLVASAP REEGVLLLGP AEAPLAVIKG RYRFRLLLKS ARNFDLSDYL RHWLAHAEKP
KGNLKLEVDV DPQSFL
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