| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0390 |
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| Symbol | |
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| ID | 5154854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 390050 |
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| End bp | 390589 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640555409 |
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| Product | putative 2'-5' RNA ligase |
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| Protein accession | YP_001236583 |
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| Protein GI | 148251998 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.117956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.359257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGTC TGTTTACTGG ACTGGAGATC CCGGCCGAGG TCGGCCAGAC TCTCTCCAAT
TTGCGGGGTG GCCTTCCCGG CGCCCGCTGG ATCGATCCGG AAAATTACCA CGTCACCTTG
CGTTTCATCG GCGATATCGA CGGCGCGTCG GCCAACGAGA TCGCCGCGAT GCTGTGGCGG
GTCAACCGCA AGCCGTTCGA AGTCACGGTG CAGGGTCTCT CGAGCTTCGG CGGCCGCAAG
CCGCGCGCTG TCGTCGCCAA CATCGCGCCC AGCCGGCCGC TGATCGAGCT GCAGGCCGAG
CTGGAACGCA TGATGCAGCG GATCGGGCTC GATCCCGAGG GACGCAAATT CGTGCCGCAT
GTGACCTTGG CGCGGCTGCA CGACGCATCG AGCCAGGACG TCGCCGATTA TCTGTCGGTC
CGGGGCTACT TCCCGAGCCG GGTGTTCGTC GCCGAGCGCT TCGTGTTGTT CTCGTCCCGT
GCTTCGACGG GGGGCGGGCC CTATGTCGTG GAGGATGCCT ACGACCTCTG CGCCGTCTAA
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| Protein sequence | MPRLFTGLEI PAEVGQTLSN LRGGLPGARW IDPENYHVTL RFIGDIDGAS ANEIAAMLWR
VNRKPFEVTV QGLSSFGGRK PRAVVANIAP SRPLIELQAE LERMMQRIGL DPEGRKFVPH
VTLARLHDAS SQDVADYLSV RGYFPSRVFV AERFVLFSSR ASTGGGPYVV EDAYDLCAV
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