| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0374 |
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| Symbol | |
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| ID | 5154234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 373309 |
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| End bp | 374196 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640555393 |
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| Product | putative RNA pseudouridine synthase (Uracil hydrolyase) |
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| Protein accession | YP_001236567 |
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| Protein GI | 148251982 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.458686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCCC GCGTGCTCCA CCGCGACGGG CTGATGCTGG TGATCGACAA GCCGGCCGGC
ATTCCCGTGC ACAAGGGACC GAAGGGCGGA GCCAATCTCG AAGCCTCGTT CGACGCGCTG
CGCTTCGGCC TGCCGCGCCC ACCGGTGCTG GCGCATCGGC TGGACAAGGA AACCTCGGGC
TGTCTGGTGC TCGGCCGCCA TCGCAAGGCA ACGGCCTCGC TCGGGCTTTT GTTCAAGCAC
GGCAAGATTT CGAAGACCTA CTGGGCGGTC GTCGAGGGCG GCCCCGACGC TGACGAAGGC
GTGATCGAAC TCCCGCTGGG CAAGCTGAAT GCGGAACGCG GCTGGTGGCA GAAGCCGGAC
CCGCAGGGCC AGCCGGCGGT GACGAAATGG CGCGTGCTGG GGCGGTCGTA TTCCCTCGTC
CCTCCGTCTC CGAACTCGGC TTCCACTTGC AGCACCGACT CCCCTCCTCC TTATGGAGGC
CAGACGAGCG AATCTCGCTC TGCAGGGTCG GGGGTGGGGG TCCCCACCGG CAGTCTCGCC
CGGAGCCACC CCCCTCCCCA ACCCTCCCCC ACAAGGGGGG AGGGAGCGCA GGGTGCCGGA
GGTGAGTCGG TACACGCCAC TGGCAGCCCG CGCCTCACCT GGCTCGCCAT GGAGCCCATC
ACCGGCCGCA CGCATCAATT GCGCGTCCAT GCGGCATCTC AGGGCTGGCC GATCGTCGGC
GACAACATCT ATGGCAACGG CCCCCGCTTC GGCGAGCCGC GGCTGCACCT GCATGCGCGC
GAGATTTCCA TTCCGCTGTC GAAGAACAAG CCGCCGGTCC ATGTCGTCGC GCCAGCGCCG
ATGCACATGC ATGAGCGGCT GCGGCTGTGC GGATGGAACG GGGAGTGA
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| Protein sequence | MLARVLHRDG LMLVIDKPAG IPVHKGPKGG ANLEASFDAL RFGLPRPPVL AHRLDKETSG
CLVLGRHRKA TASLGLLFKH GKISKTYWAV VEGGPDADEG VIELPLGKLN AERGWWQKPD
PQGQPAVTKW RVLGRSYSLV PPSPNSASTC STDSPPPYGG QTSESRSAGS GVGVPTGSLA
RSHPPPQPSP TRGEGAQGAG GESVHATGSP RLTWLAMEPI TGRTHQLRVH AASQGWPIVG
DNIYGNGPRF GEPRLHLHAR EISIPLSKNK PPVHVVAPAP MHMHERLRLC GWNGE
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