Gene BBta_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0322 
Symbol 
ID5153404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp326194 
End bp327597 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content68% 
IMG OID640555346 
Productmajor facilitator transporter 
Protein accessionYP_001236520 
Protein GI148251935 
COG category[R] General function prediction only 
COG ID[COG2270] Permeases of the major facilitator superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.169916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.209035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTA CCACGATCGA GACGTCAGAT GCGGCTCAGC AGCGGGTCTA TCCGCGGCGC 
GCCGCCGTCG TCAGCTGGAT CTTCTTCGAT TGGGCGGCGC AGCCCTATTT TACGCTGATC
ACCACCTTCG TGTTTGCGCC TTATTTCGCC GCCCATGTCG CGCCCGACGC GGCGAGCGGT
CAGGCCTTGT GGGGCTTTGC CACCGCCGCG GCCGGCATCG TGATCGCGCT GCTGTCGCCG
GTGTTCGGCG CCATCGCCGA TGCCACCGGC CGGCGCAAGC CGTGGATCGC GGCGTTCGGC
GCGATGCTCG TGGTCGGCTC CTGCCTGATG TGGATCGGCC GTCCCGGCGC GCCGGAGCTG
ATCGTCCCGC TGCTCGCAGC CTATGTCCTC GCCACGATCG GCGTCGAATT CGCGACCGTG
TTCAACAATG CGATGATGCC GACCCTGGTG CCGCCCGAGC GCATCGGCCG CCTCTCGGGC
ACCGGCTGGG CCACCGGCTA TATCGGCGGC ATCGTCTCGC TCATCCTCGT GCTCGGCTTC
CTCGCCGCCA ATCCCGACAG TGGCCGCACT CTGTTCGGGT TGCAGCCGCT GTTCGGTCTC
GATCCGGTGA CGCATGAGGG CGATCGCATC TCCGGTCCGC TCACCGGCCT CTGGTTCATC
GTGTTCGTGC TGCCGATGTT CCTGTTCACG CCGGACTATC CGGCGCGGCA CCGGCTCGGC
GCCGCGATGC GCGAGGGCCT CGGTCAATTG CAGGCGACGT TGCGCAGCCT GCCGCAGCAG
CGCGACATCG CGCTCTTTCT CATCGCCAAC ATGATCTACA CCGATGGCCT CGTGTCGCTG
TTCGCCTTCG GCGGCATCTA TGCGGCGGGC ACGTTCGGCT GGAACACGAT CCAGATCGGC
ACGTTCGGCA TCATCCTCGC GGCGGCCGGC ACGCTGGGCG GCTGGTTCGG CGGCAAGCTT
GACGACCGGC TCGGACCGAA GCGCGTCATC GCCGGCAGCA TGACGCTTCT GCTGCTCGCG
ATCATTGCGA TCCTGCTGGT GAGCCGCGAT TCGATCCTGT TCATTCCGGT GACGCCGGCG
ATGCCCGGCG GTCCGCTGTT CGCGTCGCTG CCGGAGCGCG CCTATCTGCT GCTCGGCTGC
ATCATCGGCG CCTGCGGCGC GCCGCTGCAG GCGGCGTCGC GCTCGCTGCT GATCCGGATG
GTGCCGCGGG ATCAGGTCGC GCAATATTTC GGCCTGTTCG CGCTCACGGG CAAGGTGACA
TCCTTCATCG GCCCGCTGCT GATCGGCACC GTCACCGCGC TCACTGCGAG CCAGAAGGCC
GGCATGGCCG TGCTGGTGCT GTTCTTCGCC GCCGGGCTGC TGCTGCTGGC GCGGGTCAAC
GCCCATGGTC ATGCGCGGGC TTGA
 
Protein sequence
MAVTTIETSD AAQQRVYPRR AAVVSWIFFD WAAQPYFTLI TTFVFAPYFA AHVAPDAASG 
QALWGFATAA AGIVIALLSP VFGAIADATG RRKPWIAAFG AMLVVGSCLM WIGRPGAPEL
IVPLLAAYVL ATIGVEFATV FNNAMMPTLV PPERIGRLSG TGWATGYIGG IVSLILVLGF
LAANPDSGRT LFGLQPLFGL DPVTHEGDRI SGPLTGLWFI VFVLPMFLFT PDYPARHRLG
AAMREGLGQL QATLRSLPQQ RDIALFLIAN MIYTDGLVSL FAFGGIYAAG TFGWNTIQIG
TFGIILAAAG TLGGWFGGKL DDRLGPKRVI AGSMTLLLLA IIAILLVSRD SILFIPVTPA
MPGGPLFASL PERAYLLLGC IIGACGAPLQ AASRSLLIRM VPRDQVAQYF GLFALTGKVT
SFIGPLLIGT VTALTASQKA GMAVLVLFFA AGLLLLARVN AHGHARA