| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0226 |
|---|
| Symbol | |
|---|
| ID | 5151557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 231731 |
|---|
| End bp | 233257 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640555251 |
|---|
| Product | malonyl-CoA synthase |
|---|
| Protein accession | YP_001236428 |
|---|
| Protein GI | 148251843 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0526846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGA CCGCCAACGC CAATCTGTTC GCCCGCTTGT TCGACGGTCT CGACGATCCC
AGCCGCCTCG CGATCGAGAC CCATGACGGT CAGCGCATCA CCTATGGCGA CCTGATTGCG
CGCGCGGGCC AGATGGCGAA TGTGCTGGTC AGCAGGGGCG TGAAGCCGGG CGACCGCGTC
GCGGCGCAGA CCGAGAAATC AGTGTCGGGC CTCGTGCTCT ATCTCGCCAC GGTCCGCGCC
GGCGGCGTCT ATCTGCCGCT CAACACGGCC TACACGCTCA ACGAGCTCGA CTATTTCATC
GGCGACGCCG AGCCGACCGT CGTCGTGTGC GATCCCGCCA AGGCCGAGGG CATCCGCACG
CTGGCTGCCA AGGTCGGCGC CACGGTGGAC ACGCTCGATG CGTCAGGCAA GGGCTCGCTG
ACCGAGGCCG CCGACAAGGC CGCCACCGCG TTCACCACCG TGCCGCGCGG CGCCGACGAT
CTCGCCGCGA TCCTCTATAC GTCAGGCACC ACCGGCCGCT CCAAAGGCGC GATGCTGTCC
CACGACAATC TCGCCTCGAA CTCGCTGACC CTGATCGACT ACTGGCGCTT CACCAAGGAC
GACGTGCTGA TCCACGCGCT GCCGATCTAT CATACGCATG GCCTGTTCGT GGCCAGCAAC
GTGACGCTGT TCGCGCGCGC GTCGATGATC TTCCTGCCCA AGCTCGATCC CGACCTGATC
ATCAATCTGA TGGCACGCGC CACCGTGCTG ATGGGCGTGC CGACCTTCTA CACCCGGCTG
CTGCAGAACC CGCGGCTGAA CAAAGAGACG ACCAGCCACA TGCGTCTCTT CATCTCCGGC
TCTGCGCCTT TGCTCGCCGA CACCCATCGC GAATGGTTCG CGCGCACCGG CCACGCCGTG
CTCGAGCGCT ACGGCATGAC CGAGACCAAC ATGAACACGT CGAACCCGTA TGATGGCGAG
CGCGTGCCCG GCGCGGTCGG CTTCCCGCTG CCTGGCGTGT CCGTGCGCGT GACCGATCCC
GAGACCGGCA AGGAGCTCGC GCGCGACGAG ATCGGCATGA TCGAGGTGAA GGGCCCGAAC
GTGTTCAAGG GCTATTGGCG GATGCCGGAG AAGACCAAGT CGGAGTTCCG TCCTGACGGC
TTCTTCATCA CCGGCGACCT CGGCAAGATC GACACGCAGG GCTACGTCCA CATCGTCGGG
CGCGGCAAGG ATCTGGTCAT CTCCGGCGGC TTCAACGTCT ATCCGAAGGA GATCGAGAGC
GAGATCGACG CCATGCCGGG CGTGGTCGAG TCCGCCGTCA TCGGCGTGCC GCATGCCGAT
TTCGGCGAGG GCGTCACGGC GGTCGTCGTG CGTCACCCCG GTGCTGACGT CAATGAAGCC
AGCGTGCTCA AGGGGCTCGA CGGCCGGCTG GCCAAGTTCA AGATGCCGAA GCGCGTGTTC
GTGGTCGACG AGCTGCCGCG CAACACCATG GGCAAGGTGC AGAAGAACGT GCTGCGTGAT
CAGTACAAGG ACATCTATAC GAAATGA
|
|---|
| Protein sequence | MNQTANANLF ARLFDGLDDP SRLAIETHDG QRITYGDLIA RAGQMANVLV SRGVKPGDRV
AAQTEKSVSG LVLYLATVRA GGVYLPLNTA YTLNELDYFI GDAEPTVVVC DPAKAEGIRT
LAAKVGATVD TLDASGKGSL TEAADKAATA FTTVPRGADD LAAILYTSGT TGRSKGAMLS
HDNLASNSLT LIDYWRFTKD DVLIHALPIY HTHGLFVASN VTLFARASMI FLPKLDPDLI
INLMARATVL MGVPTFYTRL LQNPRLNKET TSHMRLFISG SAPLLADTHR EWFARTGHAV
LERYGMTETN MNTSNPYDGE RVPGAVGFPL PGVSVRVTDP ETGKELARDE IGMIEVKGPN
VFKGYWRMPE KTKSEFRPDG FFITGDLGKI DTQGYVHIVG RGKDLVISGG FNVYPKEIES
EIDAMPGVVE SAVIGVPHAD FGEGVTAVVV RHPGADVNEA SVLKGLDGRL AKFKMPKRVF
VVDELPRNTM GKVQKNVLRD QYKDIYTK
|
|---|
| |