Gene BBta_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0223 
SymboluppP 
ID5151631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp228364 
End bp229170 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content63% 
IMG OID640555247 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001236425 
Protein GI148251840 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCAG ATACGCTGCG GGCGGTGCTT CTCGGGATTA TCGAGGGCGT CACCGAATTT 
CTTCCCGTAT CGTCGACAGG CCATCTGTTG CTGGCGGAAC GCTTCTTCGG CCTCGGCGAG
GACGGCTTCT GGAAGAGCTT CGCGATCCTG ATCCAGCTCG GCGCCATCCT CGCGATCGTT
GCGCTGTACT TCTTCAAGCT GTCGCGCGTC GCCATCGGCG CGCTGTCGAA CGCTGACGAC
CGTCGCTTCA TCATCGGCGT GCTGATCGCC TTCCTGCCCG CCGTGATCAT CGGCCTCATC
GCCGGCAAAT ACATCAAGGC GCTCCTGTTC GATCCCTGGG TCGTCTGCTT CTCGCTGATC
GTCGGCGGCG CCATCCTGCT GTGGGTCGAC CAGATCGATC TGAAGCCAAG GGAGCACGAC
GCCACGCGCT ATCCGCTGCT GATGTATCTC TGGATCGGCG TGGCGCAGTG CCTGGCGATG
ATCCCCGGCG TGTCGCGCTC TGGCGCGACC ATCGTGGCCG CGATGCTGCT CGGCGGCGAC
AAGCGCTCGG CCGCGGAATT CTCCTTCTTC CTGGCGATCC CGACCATGGT CGGCGCCTTC
GTCTACGACT TCTACAAGAG CCGCGCCGAG ATGACGTCCG ACCATCTCGG CCTGGTCGCG
ATCGGCTTCG TCGTGTCCTT CATCACCGCG ATGATCGTGG TGAAGGCCTT CCTCGGCTAC
GTCACCCGCC ACGGCTTCGT GCTGTTTGCC TGGTGGCGCG TCATCGTCGG TACTTTGGGC
CTGATCGCGC TGGCGCTCGG CAAGTAG
 
Protein sequence
MMSDTLRAVL LGIIEGVTEF LPVSSTGHLL LAERFFGLGE DGFWKSFAIL IQLGAILAIV 
ALYFFKLSRV AIGALSNADD RRFIIGVLIA FLPAVIIGLI AGKYIKALLF DPWVVCFSLI
VGGAILLWVD QIDLKPREHD ATRYPLLMYL WIGVAQCLAM IPGVSRSGAT IVAAMLLGGD
KRSAAEFSFF LAIPTMVGAF VYDFYKSRAE MTSDHLGLVA IGFVVSFITA MIVVKAFLGY
VTRHGFVLFA WWRVIVGTLG LIALALGK