Gene BBta_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0220 
Symbol 
ID5151302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp225407 
End bp226192 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID640555244 
Producthypothetical protein 
Protein accessionYP_001236422 
Protein GI148251837 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACG CTGTCGAATC TGCCGATCTC CCCGCTTTCA TCGCCGTCGG CGCCGGCGAG 
CAATCGCGCC AGATCGCGGT GCGCGCCAGG ACCGGCCATC CGCCCGGGCT GTTCTGGCTT
GGCGGCTTCA ATTCCGACAT GAAGGGCACC AAGGCGCTGG CGCTTGACGC CTGGGCGGCC
GAGCGCGGCC GCGCCTGTGT CCGGTTCGAC TATTCCGGCC ATGGCGAATC GGGCGGACGC
TTCGTCGACG GCACCATCAG CCGCTGGCTG GAGGAGAGCG TCGCGGTGTT CCGCCAATTC
TGCAGGGGGC CGCAGGTGGT GATCGGCTCG TCGATGGGCG GCTGGATGGC GCTGCTGCTC
GCGCGCGAAC TGCTGAGGCA GCCGGCCGAG GCGACGCTCG CAGGTCTGGT GCTGATCGCG
CCGGCGCCCG ACTTCACCGA GGAGCTGATG TGGAAGGGCT TCTCCGCCGA GATCCGCCGG
GAGATCGAGG CCAACGGTGT CTGGATGCGT CCCTCCGAAT ATGGCGAGCC CTATCCGATC
ACCAAGGTGC TGATCGAGGA CGGCCGCAAC CATCTGCTGC TCGGCGGCGC CATCACGGTC
GGCTGTCCGG TGCGCATCCT GCAGGGCGCG CAGGATCCGG ATGTGCCGTG GCAGCACGCG
TTCGCGCTGG CCCACCGGCT GCCCGCCGAG GATGTGGTGC TGACGATGAT CCAGGATGGC
GATCACCGGC TGTCGCGGCC GCAGGACATC GCGCGCATGC TGGCGGCGGT CGGCGAGATC
GGCTGA
 
Protein sequence
MNHAVESADL PAFIAVGAGE QSRQIAVRAR TGHPPGLFWL GGFNSDMKGT KALALDAWAA 
ERGRACVRFD YSGHGESGGR FVDGTISRWL EESVAVFRQF CRGPQVVIGS SMGGWMALLL
ARELLRQPAE ATLAGLVLIA PAPDFTEELM WKGFSAEIRR EIEANGVWMR PSEYGEPYPI
TKVLIEDGRN HLLLGGAITV GCPVRILQGA QDPDVPWQHA FALAHRLPAE DVVLTMIQDG
DHRLSRPQDI ARMLAAVGEI G