Gene BBta_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0188 
SymbolgrpE 
ID5150828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp194084 
End bp194704 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID640555213 
Productheat shock protein GrpE 
Protein accessionYP_001236391 
Protein GI148251806 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CCGACCTGCA TAAAAACGAT CCGGAAAACC CGGCGCAGGC CAGCGAACCC 
GTCGTCTCCA AACCCTATAT CATGCCCGAC GACCCCGAGA CCGGCTCAGC AGAGGCACTG
GCCAAGGAAG CCGCCGACGC GCGCGACAAG ATGCTGCGCA CGCTGGCGGA GATGGAGAAT
CTGCGCAAGC GCACGGCCCG TGAGGTTGCC GATGCGCGCA TCTACGGCAT CACCGGCTTC
GCGCGCGACG TGCTCGATAT TGCCGACAAT CTGCAGCGTG CACTCGATGC CGTGCCGGCC
GAGACGCGGG CCAATGCCGA TCCCGGCCTC AAGGCGCTGA TCGAAGGCGT CGAGCTGACC
GAGCGCTCGC TGCTCAACAC GCTGGAGAAG AACGGCGTCA AGAAATTCGA TCCGACCGGA
CAGAAGTTCG ACCCGAACTT CCAACAGGCA ATGTATGAGG TCCCCGATGC CTCGGTGCCG
TCGGGCACGG TGGTGCAGGT CGTACAGGCC GGTTTCATGA TCGGCGAGCG CGTGCTGCGC
CCGGCGCTGG TCGGCGTGTC CAAGGGCGGC GCCAAGCCGG CGCCCGCTGC GAACAACGAT
CAGCCCAACA ACGCGGCCTG A
 
Protein sequence
MTDPDLHKND PENPAQASEP VVSKPYIMPD DPETGSAEAL AKEAADARDK MLRTLAEMEN 
LRKRTAREVA DARIYGITGF ARDVLDIADN LQRALDAVPA ETRANADPGL KALIEGVELT
ERSLLNTLEK NGVKKFDPTG QKFDPNFQQA MYEVPDASVP SGTVVQVVQA GFMIGERVLR
PALVGVSKGG AKPAPAANND QPNNAA