Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0188 |
Symbol | grpE |
ID | 5150828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 194084 |
End bp | 194704 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640555213 |
Product | heat shock protein GrpE |
Protein accession | YP_001236391 |
Protein GI | 148251806 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC CCGACCTGCA TAAAAACGAT CCGGAAAACC CGGCGCAGGC CAGCGAACCC GTCGTCTCCA AACCCTATAT CATGCCCGAC GACCCCGAGA CCGGCTCAGC AGAGGCACTG GCCAAGGAAG CCGCCGACGC GCGCGACAAG ATGCTGCGCA CGCTGGCGGA GATGGAGAAT CTGCGCAAGC GCACGGCCCG TGAGGTTGCC GATGCGCGCA TCTACGGCAT CACCGGCTTC GCGCGCGACG TGCTCGATAT TGCCGACAAT CTGCAGCGTG CACTCGATGC CGTGCCGGCC GAGACGCGGG CCAATGCCGA TCCCGGCCTC AAGGCGCTGA TCGAAGGCGT CGAGCTGACC GAGCGCTCGC TGCTCAACAC GCTGGAGAAG AACGGCGTCA AGAAATTCGA TCCGACCGGA CAGAAGTTCG ACCCGAACTT CCAACAGGCA ATGTATGAGG TCCCCGATGC CTCGGTGCCG TCGGGCACGG TGGTGCAGGT CGTACAGGCC GGTTTCATGA TCGGCGAGCG CGTGCTGCGC CCGGCGCTGG TCGGCGTGTC CAAGGGCGGC GCCAAGCCGG CGCCCGCTGC GAACAACGAT CAGCCCAACA ACGCGGCCTG A
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Protein sequence | MTDPDLHKND PENPAQASEP VVSKPYIMPD DPETGSAEAL AKEAADARDK MLRTLAEMEN LRKRTAREVA DARIYGITGF ARDVLDIADN LQRALDAVPA ETRANADPGL KALIEGVELT ERSLLNTLEK NGVKKFDPTG QKFDPNFQQA MYEVPDASVP SGTVVQVVQA GFMIGERVLR PALVGVSKGG AKPAPAANND QPNNAA
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