| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0172 |
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| Symbol | |
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| ID | 5150376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 178850 |
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| End bp | 179836 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640555197 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_001236375 |
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| Protein GI | 148251790 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGC AGCGCGTGCC CCCCACGCCT AACAACTTCC ATTTGTGGTT CAAGTACTCG
CTGGGATCGG CGTCGGACCT GAAGCGTGCC GTCGACATTC TTGTCAGCAA CAAGCGGAAG
TTCGACAAGA CCACAAACCA GGCGCTGTTC GACACCTATA TCGGCCAGCA GGGAACGGAA
GCGGCTGTCG TCCATAAAGT CTCGCAACAG CTGCATGGCG TGATGGACTC CGCCAAGAGC
TATCTGACCG CCGCCATCGC CGACAACCGC ACGCATATGG CGGCGATCGA CGGCGTCGCC
GAGCGCAGCG AGCAGGGTGT CGATCCGAAG ATCCTGATCG AGAATCTCGT CAGCGAACTC
GCCCAGGCCA CCGCGCGGGC GGCCAAGCTC GAAGCGAGCT TCGCCGAGAA GTCGCGCGAG
CTCGACACGA TCAGAGACTC GCTCAACAAA TCGGAGCAGC GCGCGCGCAC CGATACGCTG
ACTGGTCTGC CAAATCGCCG CGCGCTCGAG GAATTCTTCC GTCACGCCCA GATCGAGTCG
ATGGAGAGGG ACGAGCCGCT CAGCATCCTG CTGATCGACG TCGATCACTT CAAGAAGTTC
AATGACAATT ACGGTCACGG TGTCGGTGAT CAGGTGCTGC GCCTGGTGGC CAAGGCACTG
CGCGAGCGGG TCCGCGACCA GGATCTTCCG GCACGCTATG GTGGCGAGGA GCTGATCGCA
GTGCTGCCGC AGACCGATCT CGAAGGCTGC CATGCCATTG CGGAACGGAT CCGGCGCACG
ATCGCGGATT GTCAGTTCAC CCGGCGTTCA ACCGGCGAGG TGCTGCCCCA GATCACCGTG
TCGATCGGCG TGGGCCAGTT CCAGTTCGGC GAATCGATGG CCGATCTGAT CGACCGCTGC
GACCGCGCCC TCTATCTCGC CAAGAAGCTC GGCCGCAACC GCGTCATTAC CGAGCTCGAG
CTCGACCGCA AGCTCGCGGT CGGCTGA
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| Protein sequence | MAQQRVPPTP NNFHLWFKYS LGSASDLKRA VDILVSNKRK FDKTTNQALF DTYIGQQGTE
AAVVHKVSQQ LHGVMDSAKS YLTAAIADNR THMAAIDGVA ERSEQGVDPK ILIENLVSEL
AQATARAAKL EASFAEKSRE LDTIRDSLNK SEQRARTDTL TGLPNRRALE EFFRHAQIES
MERDEPLSIL LIDVDHFKKF NDNYGHGVGD QVLRLVAKAL RERVRDQDLP ARYGGEELIA
VLPQTDLEGC HAIAERIRRT IADCQFTRRS TGEVLPQITV SIGVGQFQFG ESMADLIDRC
DRALYLAKKL GRNRVITELE LDRKLAVG
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