Gene BBta_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0171 
SymbolleuS 
ID5150375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp175902 
End bp178526 
Gene Length2625 bp 
Protein Length874 aa 
Translation table11 
GC content65% 
IMG OID640555196 
Productleucyl-tRNA synthetase 
Protein accessionYP_001236374 
Protein GI148251789 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCG AACGCTACAA CGCCCGTGAA GCCGAGCCGC GCTGGCAGCG CCAGTGGGAC 
GAGAAGGCGA TCTTCGCCAC CAAGAACGAC GATCCGCGTC CGAAATACTA CGTACTCGAG
ATGTTTCCCT ATCCATCGGG GCGCATCCAT ATCGGCCATG TCCGTAATTA TACGCTGGGC
GACGTGCTGG CGCGCTTCAT GCGCGCCAAG GGTTTCAACG TACTGCACCC GATGGGCTGG
GACGCGTTCG GCCTGCCGGC CGAGAACGCC GCGATCGAGC GCAAGGTCGC GCCGAAAGCA
TGGACCTACG ACAATATCGC GGCAATGAAG AAGCAGCTGC GCTCGATCGG CCTGTCGCTC
GACTGGGCCC GCGAGTTCGC GACCTGCGAC CCGTCCTACT ACAAGCACCA GCAGAAGATG
TTCCTCGACT TCATGCAGGC GGGGCTGGTG GAGCGCGAGC AGCGCAAGGT GAACTGGGAT
CCGGTCGACA TGACCGTGCT CGCCAACGAG CAGGTCATCG ACGGCCGCGG CTGGCGCTCC
GGTGCGGTGG TCGAACAGCG TGAGATGAAC CAGTGGGTGT TCAAGATCAC GAAGTACTCG
CAGGAGCTGC TGGACGCGCT GGACGGACTG GACCGCTGGC CCGACAAGGT GCGGCTGATG
CAGCGCAACT GGATCGGCCG CTCCGAGGGC CTGCTGATCC GCTTCGCGCT GGATCCGCAG
ACCACACCGG CGGGCGAGAC CGAGCTGAAG ATCTTCACGA CGCGACCGGA CACGCTGTTC
GGCGCCAAGT TCATGGCGAT CTCGGCCGAC CATCCGCTGG CGCAGGCGGC CGCGGCCAAG
AACCCGGAAC TCGCCGCGTT CATCGCCGAG ATCAAGCGCA TCGGCACCGC CCAGGAGGCA
ATCGACACCG CGGAGAAGCA GGGCTTCGAT ACCGGCATCC GCGCGGTGCA TCCGTTCGAC
CCGAGCTGGA CCCTGCCGGT CTATGTCGCC AATTTCGTAC TGATGGAGTA CGGCACCGGC
GCCATCTTCG GCTGTCCGGC GCATGACCAG CGCGACCTCG ACTTCGTCAA CAAATACGGT
CTCGGCAACA CGCCGGTGGT CTGCCCGGAG GGGCAGGACC CGGCGTCGTT CGTGATCACC
GACACCGCCT TCGACGGCGA CGGGCGCCTG ATCAATTCGC GCTTCCTCGA CGGCATGACC
ATCGCGCAGG CCAAGGACGA GGTTGCCAAG CGGCTCGAGG CCGAGCAGCG CGGCGGCGCG
GCGGTCGGCG AGCGCCAGGT CAATTTCCGC CTGCGCGACT GGGGCATCTC GCGGCAGCGT
TATTGGGGCT GCCCGATCCC GGTGATCCAT TGCCCGACAT GCGATGTCGT GCCGGTGCCG
GCTAAGGACC TGCCCGTGGT GCTGCCGGAC GACGTCACCT TCGACAAGCC GGGCAACGCG
CTCGACCACC ATCCGACCTG GAAGCACGTC ACCTGCCCGA AATGCGGGGG CAAGGCGACC
CGCGAAACCG ACACCATGGA CACCTTCGTC GATTCGTCCT GGTACTTCGC CCGCTTCACC
GATCCGTGGA ACGAGACCGC GCCGACCACA CCCGATGTCG CCAACCGGAT GATGCCGGTC
GACCAGTATA TCGGCGGCGT CGAGCACGCG ATCCTGCATC TGCTCTACAG CCGCTTCTTC
ACCCGCGCGA TGAAGGCGAC CGGGCACGTC GCGATGGACG AGCCGTTCGC CGGCATGTTC
ACGCAGGGCA TGGTGGTGCA TGAGACCTAC CAGAAGGCCG ACGGCACCTA CGTCAATCCG
GCCGAGGTCA AGATCGAGGT CGGCGGCAAT GGCCGCCGCG CGGTGCTGAC CGCGACCGGC
GAGGACATCA CGATCGGCCC GATCGAGAAG ATGTCGAAGT CGAAAAAGAA CACGGTCGAT
CCCGACGACA TCATCGAGAG CTACGGCGCC GACGTCGCCC GCTGGTTCAT GCTGTCGGAC
TCGCCGCCGG ACCGCGACGT GATCTGGAGC GACGAGCGGG TGCAGGGCGC GGCACGCTTC
GTCCAGCGTC TCTGGCGGCT GGTCAACGAA TCGGTCGCAG CAGGCCAAGA GGCGCCCTCC
TCCCGCCCGG CCACGTTCGG CCCGGACGCG CTGGCGCTGC GCAAGGCCGC GCATGGCGCG
CTCGACAAGG TGACCGGCGG CATCGAGCGG CTGCATTTCA ACGTCTGCCT GGCGCATATC
CGCGAATTCG CCAATGCGCT GGCCGAGGTG CTGGCGCGGC CGGCCAAGCC GGCGCCCGAC
CTGGCCTGGG CGATCCGCGA GGCGGCCCAG ATCCTGGTGC AGCTGTTCTC GCCGATGATG
CCGCATCTGG CTGAAGAATG CTGGCAGGTG CTGGGCCAGG GCGGGCTGAT CTCGGAGGCC
TCCTGGCCGC AAATCGAACG AGATTTGCTG GTTGAGGACA GCGTGACCCT TGTCGTGCAG
GTCAACGGCA AGAAGCGCGG AGAAGTCACA GTCGCCAGCA ACGCGCAGAA TCCGGAAATT
GAGTCTGCCG TTTTGGCCCT TGATGCAGTA AAATTGGCGC TGGATGGCAA GCCCGTCCGC
AAGGTGATCA TTGTTCCCAA GAGGATCGTG AATGTCGTCG GCTAG
 
Protein sequence
MTSERYNARE AEPRWQRQWD EKAIFATKND DPRPKYYVLE MFPYPSGRIH IGHVRNYTLG 
DVLARFMRAK GFNVLHPMGW DAFGLPAENA AIERKVAPKA WTYDNIAAMK KQLRSIGLSL
DWAREFATCD PSYYKHQQKM FLDFMQAGLV EREQRKVNWD PVDMTVLANE QVIDGRGWRS
GAVVEQREMN QWVFKITKYS QELLDALDGL DRWPDKVRLM QRNWIGRSEG LLIRFALDPQ
TTPAGETELK IFTTRPDTLF GAKFMAISAD HPLAQAAAAK NPELAAFIAE IKRIGTAQEA
IDTAEKQGFD TGIRAVHPFD PSWTLPVYVA NFVLMEYGTG AIFGCPAHDQ RDLDFVNKYG
LGNTPVVCPE GQDPASFVIT DTAFDGDGRL INSRFLDGMT IAQAKDEVAK RLEAEQRGGA
AVGERQVNFR LRDWGISRQR YWGCPIPVIH CPTCDVVPVP AKDLPVVLPD DVTFDKPGNA
LDHHPTWKHV TCPKCGGKAT RETDTMDTFV DSSWYFARFT DPWNETAPTT PDVANRMMPV
DQYIGGVEHA ILHLLYSRFF TRAMKATGHV AMDEPFAGMF TQGMVVHETY QKADGTYVNP
AEVKIEVGGN GRRAVLTATG EDITIGPIEK MSKSKKNTVD PDDIIESYGA DVARWFMLSD
SPPDRDVIWS DERVQGAARF VQRLWRLVNE SVAAGQEAPS SRPATFGPDA LALRKAAHGA
LDKVTGGIER LHFNVCLAHI REFANALAEV LARPAKPAPD LAWAIREAAQ ILVQLFSPMM
PHLAEECWQV LGQGGLISEA SWPQIERDLL VEDSVTLVVQ VNGKKRGEVT VASNAQNPEI
ESAVLALDAV KLALDGKPVR KVIIVPKRIV NVVG