| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0163 |
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| Symbol | rho |
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| ID | 5149179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 166245 |
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| End bp | 167510 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640555188 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001236366 |
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| Protein GI | 148251781 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.386148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGAAA TCAAACTACA GGACCTCAAG TCAAAGACGC CGGCCGAGCT CGTCTCCTTC
GCGGAGGAAA ACGGGGTCGA GAACGCCAGC ACGATGCGCA AGCAGGAGTT GATGTTTGCC
ATTCTCAAAC AGCTTGCGAT TCAGGAAACG GACATCATCG GTGAAGGCGT CGTCGAGGTT
CTCTCCGACG GCTTCGGCTT CCTGCGCTCG CCGGACGCCA ACTACCTTCC AGGCCCGGAT
GACATCTATG TATCGCCGTC GCAGATCCGC CGCTTTGGCC TGCGCACCGG TGATACGATC
GAAGGCCATA TCCGCAGCCC GAAGGAGGGC GAGCGCTATT TCGCGCTGCT GAAGGTCAAT
ACGCTGAACT TCGAGGATCC CGAGAAGTCC AAGCACAAGG TCAATTTCGA CAATCTCACG
CCGCTCTTCC CGGACGAGCG CTTCCGGCTC GAGCTTGAGG ATCCGACCCG CAAGGATCTG
TCGCCGCGCG TCATCGACAT CGTCGCGCCG ATCGGCAAGG GTCAGCGCGC TTTGATCGTC
GCTCCGCCGC GGACCGGCAA GACCGTGCTG ATGCAGAACA TCGCGCACTC GATCACGGCC
AATCATCCCG AGTGCTACCT CATCGTGCTC CTGATCGACG AGCGTCCGGA GGAAGTCACG
GATATGCAGC GCTCGGTCAA GGGCGAGGTC GTGTCGTCGA CCTTCGACGA ACCGGCCGCG
CGTCACGTTC AGGTCGCGGA GATGGTGATC GAAAAGGCCA AGCGCCTAGT TGAGCATGGC
CGCGACGTGG TCATTCTGCT GGACTCGATC ACCCGCCTCG GCCGCGCCTA CAACACCGTC
GTGCCGTCCT CGGGCAAGGT GCTGACCGGC GGTGTCGACG CCAATGCGCT GCAGCGGCCG
AAGCGCTTCT TCGGTGCGGC CCGCAACATC GAGGAGGGCG GCTCCTTGAC CATCATAGCG
ACCGCGCTGG TCGATACCGG CAGCCGCATG GACGAGGTCA TCTTCGAAGA GTTCAAGGGC
ACCGGCAACT CCGAGCTCAT CCTCGACCGC AAGGTCGCGG ACAAGCGGAC CTTCCCGGCG
ATCGACATCG CGCGCTCCGG CACACGCAAA GAAGAGCTCA TCACCGAGCC GCAGAACCTC
AAGAAGATGT ACGTGCTCCG CCGCATCCTC AATCCGATGG GCACCATGGA CGCGATCGAC
TTCCTGCTCG ACAAGCTGCG CAGCACCAAG AGCAATGCGG AGTTCTTCGA GTCGATGAAC
ACCTGA
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| Protein sequence | MREIKLQDLK SKTPAELVSF AEENGVENAS TMRKQELMFA ILKQLAIQET DIIGEGVVEV
LSDGFGFLRS PDANYLPGPD DIYVSPSQIR RFGLRTGDTI EGHIRSPKEG ERYFALLKVN
TLNFEDPEKS KHKVNFDNLT PLFPDERFRL ELEDPTRKDL SPRVIDIVAP IGKGQRALIV
APPRTGKTVL MQNIAHSITA NHPECYLIVL LIDERPEEVT DMQRSVKGEV VSSTFDEPAA
RHVQVAEMVI EKAKRLVEHG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP
KRFFGAARNI EEGGSLTIIA TALVDTGSRM DEVIFEEFKG TGNSELILDR KVADKRTFPA
IDIARSGTRK EELITEPQNL KKMYVLRRIL NPMGTMDAID FLLDKLRSTK SNAEFFESMN
T
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