Gene BBta_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0162 
Symbol 
ID5149915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp165586 
End bp166008 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content55% 
IMG OID640555187 
Producthypothetical protein 
Protein accessionYP_001236365 
Protein GI148251780 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0779497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAGT GGATCAAGGC GCTGCATGTC ATTGCTGTCA TCGCCTGGAT GGCCGGCATG 
CTCTATCTGC CCCGCTTGTT CGTGTATCAC TGCGACACGG AGATCGGCTC GAAGCAGTCC
GAGACGTTCA AGATCATGGA ACGCCGGCTG CTGAAGGCGA TCATCAATCC AGCGATGATG
GTGACTTGGC TGGCCGGTCT CTACATGGTG TGGGCTGGAC ATTGGTATGC CAGCGGCTGG
TTCCACGGCA AATTCCTGCT CGTTCTGATC CTGTCCGGCG TCCACGGTCT GTTCACCCGT
TGGGTCAAGG ACTTTGCCGC CGATCGAAAC ACCCATACTC AGAAATTCTA TCGCTATATC
AACGAGGTAC CGACAATCCT CATGATCGGG ATCGTGGTTC TCGTCATCGT CAAGCCGTTC
TGA
 
Protein sequence
MYEWIKALHV IAVIAWMAGM LYLPRLFVYH CDTEIGSKQS ETFKIMERRL LKAIINPAMM 
VTWLAGLYMV WAGHWYASGW FHGKFLLVLI LSGVHGLFTR WVKDFAADRN THTQKFYRYI
NEVPTILMIG IVVLVIVKPF