Gene BBta_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0109 
Symbolohr 
ID5149549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp113897 
End bp114322 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content68% 
IMG OID640555137 
Productorganic hydroperoxide resistance protein 
Protein accessionYP_001236315 
Protein GI148251730 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1764] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID[TIGR03561] peroxiredoxin, Ohr subfamily 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGA ACGTGCTCTA CAAGACCAGC GCCAAGGCCA CCGGCGGCCG CGATGGTGAG 
GCGGCCACTC TCGACGGCTC GCTGAGCGTC AAGCTCTCCA CGCCGAAGGA GCTCGGCGGT
GGCGGCGGCG CCGGCAACAA TCCGGAGCAG CTGTTCGCAG CCGGCTACGC CGCCTGCTTC
ATCGGCGCCA TGAAGTTCGT TGCGTCGCAA GGCGGCCCGA AGGTTCCGGC CGACGCCTCG
GTGACGTCAA CGGTCGGCAT CGGCCCGCGT TCCGAAGGCG GCTTCGGCAT CACCGTCGAG
CTCGCGGTCG CGCTGCCCGG CCTTGCCAAG GCGGATGCCG AGGCGCTGGT CGAGAAGGCC
CACCAAGTGT GCCCGTACTC GAACGCGACC CGCAACAATG TGGACGTGAA GCTCAGCGTC
ATCTGA
 
Protein sequence
MSVNVLYKTS AKATGGRDGE AATLDGSLSV KLSTPKELGG GGGAGNNPEQ LFAAGYAACF 
IGAMKFVASQ GGPKVPADAS VTSTVGIGPR SEGGFGITVE LAVALPGLAK ADAEALVEKA
HQVCPYSNAT RNNVDVKLSV I