Gene BBta_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0073 
Symbol 
ID5152000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp73301 
End bp74302 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content66% 
IMG OID640555101 
Productputative glyoxylate reductase 
Protein accessionYP_001236280 
Protein GI148251695 
COG category[R] General function prediction only
[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.692518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCTA GGAAAAAGCC CCTCGTCGTC GTGACACGCA AGCTGCCGGA CTCGGTCGAG 
ACGCGCATGC GCGAGCTGTT CGACGCGCGG CTCAATCTCG ACGACGAGCC GATGAGCCAG
GACCAGCTCG CCGACGCGGT GCGCACCGCC GAGGTGCTGG TTCCGACCGT CACCGACCAC
ATCAGCGCTG ACATTCTGAA TCAGCCCGAT TGCAAGCTGC GGATGATCGC CAATTTCGGC
AATGGCGTCG ACAATATCGA CGTCGCGGCG GCCGTCGCGC GCGGCATCAC CGTCACCAAC
ACGCCGAAGG TCCTCACCGA GGACACCGCC GACATGACCA TGGCGCTGAT CCTCGCCGTG
CCGCGCCGGC TGATCGAGGG CGCCTCGATC CTCACCGAAG GCAAGAACTG GGCAGGCTGG
TCGCCGACCT GGATGCTCGG CCATCGCATC GGCGGAAAAA GGCTCGGCAT CATCGGCATG
GGCCGCATCG GCCAGGCGGT CGCCCGGCGC GCCCGCGCCT TCGGCCTGCA GATCCACTAT
CACAACCGCC GCCCTGTCGC GCCCGTCATC GCCGACGAAC TCGGCGCCAC CTATTGGGAA
AGCCTCGACC AGATGCTGGC CCGGATGGAC ATCATCTCGG TGAACTGCCC GCACACGCCG
GCGACGTTCC ACCTGCTGTC GGCGCGCCGG CTGAAGCTGA TCCGCAAGGA TGCTTACATC
GTCAACACCG CGCGCGGCGA GGTGATCGAC GAGGAGACGA TGACGCGGCT GATCGAGGCC
GGCGATATCG CGGGTGCAGG CCTCGACGTG TTCGAGCACG AGCCGGCGGT CAATCCGCGG
CTGGTGCGGC TCGCCAAATC CGGCAAGGTG ACCTTGCTGC CGCATATGGG CTCGGCCACC
ATCGAAGGCC GCGTCGAAAT GGGCGAGAAG GTCATCATCA ACATCAAGAC CTTCCTCGAC
AACCACCGCC CGCCGGACCG CGTGCTGCCG AGCATGCTGT AG
 
Protein sequence
MSARKKPLVV VTRKLPDSVE TRMRELFDAR LNLDDEPMSQ DQLADAVRTA EVLVPTVTDH 
ISADILNQPD CKLRMIANFG NGVDNIDVAA AVARGITVTN TPKVLTEDTA DMTMALILAV
PRRLIEGASI LTEGKNWAGW SPTWMLGHRI GGKRLGIIGM GRIGQAVARR ARAFGLQIHY
HNRRPVAPVI ADELGATYWE SLDQMLARMD IISVNCPHTP ATFHLLSARR LKLIRKDAYI
VNTARGEVID EETMTRLIEA GDIAGAGLDV FEHEPAVNPR LVRLAKSGKV TLLPHMGSAT
IEGRVEMGEK VIINIKTFLD NHRPPDRVLP SML