Gene BBta_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0055 
SymbolnusA 
ID5152432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp56237 
End bp57850 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content67% 
IMG OID640555085 
Producttranscription elongation factor NusA 
Protein accessionYP_001236264 
Protein GI148251679 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01954] transcription termination factor NusA, C-terminal duplication
[TIGR01953] transcription termination factor NusA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.255127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA GCGCCAACCG GTTGGAACTG CTGCAGATCG CCGACGCCGT CGCGCGCGAG 
AAGTCGATCG ACCGCGGCAT CGTGATCGCC GCCATGGAAG ACGCGATCGC CAAGGCCGCC
CGCGCCCGCT ATGGCAGCGA GACTGACGTT CACGCCGAGA TCGACCCGCG CAGAGGCGAG
CTCCGGCTGT CGCGCCATAT GCTGGTCGTC GAAAAGGTCG AGAACCCCTC CAACCAGATC
TCGCTGGATG ACGCGCGCCG CGCCAATCCG GGCGCGCAGA TCGGCGACAC CATCGCCGAC
ACGCTGCCGC CGCTGGAATA TGGCCGCATC GCCGCGCAGT CGGCCAAGCA GGTGATCGTG
CAGAAGGTGC GCGAGGCCGA GCGCGACCGG CAGTACCAGG AGTTCAAGGA CCGCATCGGC
GACATCGTCA ACGGCGTCGT CAAGCGTGTC GAATATGGCA GCGTAATCCT CGACCTCGGC
CGCGGCGAGG CGATCATCCG CCGCGACGAG ATGCTGCCGC GCGAGGTCTT CCGCAACGGC
GACCGCGTCC GCGCTTATGT GTTCGACGTC CGCCGCGAGA CCCGCGGCCC GCAGATCTTC
CTGTCGCGCA CCCATCCGCA ATTCATGGCC AAGCTGTTCG CGCAGGAAGT GCCCGAGATC
TATGACGGCA TCGTCGAGAT CAAGGCCGTC GCCCGCGATC CCGGCTCGCG CGCCAAGATC
GGCGTCGTCT CCCGCGACTC CTCGGTCGAC CCGGTCGGCG CCTGCGTCGG CATGCGCGGC
TCGCGCGTGC AGGCCGTGGT GAACGAGCTG CAGGGCGAGA AGATCGACAT CATCCCGTGG
TCGCCCGACA TCGCGACCTT CGTGGTCAAC GCGCTGGCGC CGGCCGAAGT GGCCAAGGTC
GTCATCGACG AGGACCGCGA GCGCATCGAA GTCGTCGTGC CCGACACCAA CAACCAGCTG
TCGCTGGCGA TCGGCCGGCG CGGCCAGAAC GTCCGCCTCG CGTCGCAGCT GACCGGCTGG
GACATCGACA TTCTGACCGA GCAGGAGGAA TCGGAGCGTC GCCAGGCCGA TTTCGAGAAC
TCGACCCGCG TCTTCATGGA ATCGCTCAAT GTCGACGAGG TCGTCGGCCA GCTGCTGGCG
TCCGAAGGCT TCACCTCGGT CGAGGAATTG GCGTTGGTCG ATCTCAAGGA TCTCGCCGGC
ATCGAGGGCT TCGACGAGGA GACCGCGACC GAGCTGCAGA CCCGCGCCCG CGAGTTCCTG
GAGCAGCAGG AGGCCGAGCT CGAGGCCAAG CGCAAGGAGC TCGGCGTCGA GGACGCGGTG
AAGACCGTGC CCGGCGTCAC CTCCAAGATG CTGGTCAAGT TCGGCGAGAA CGACATCAAG
ACCGTCGACG ACCTCGCCGG CTGCGCCACC GACGATCTGG TCGGCTGGAC CGAGCGCAAG
GATAGCGGCG AGCAGACCAA GCACGCCGGC ATTCTCGACG GCCTCGAGGT TTCGCGCGAC
GATGCCGAAG CCATGGTCAT GCAGGCCCGC GTCAAGGCCG GCTGGATCAG CGAAGCCGAC
ATTGCCAAGC CGGAAGCCGA GGACGAGGAC GCCTCCGAAG GACAGCCTGC CTGA
 
Protein sequence
MAVSANRLEL LQIADAVARE KSIDRGIVIA AMEDAIAKAA RARYGSETDV HAEIDPRRGE 
LRLSRHMLVV EKVENPSNQI SLDDARRANP GAQIGDTIAD TLPPLEYGRI AAQSAKQVIV
QKVREAERDR QYQEFKDRIG DIVNGVVKRV EYGSVILDLG RGEAIIRRDE MLPREVFRNG
DRVRAYVFDV RRETRGPQIF LSRTHPQFMA KLFAQEVPEI YDGIVEIKAV ARDPGSRAKI
GVVSRDSSVD PVGACVGMRG SRVQAVVNEL QGEKIDIIPW SPDIATFVVN ALAPAEVAKV
VIDEDRERIE VVVPDTNNQL SLAIGRRGQN VRLASQLTGW DIDILTEQEE SERRQADFEN
STRVFMESLN VDEVVGQLLA SEGFTSVEEL ALVDLKDLAG IEGFDEETAT ELQTRAREFL
EQQEAELEAK RKELGVEDAV KTVPGVTSKM LVKFGENDIK TVDDLAGCAT DDLVGWTERK
DSGEQTKHAG ILDGLEVSRD DAEAMVMQAR VKAGWISEAD IAKPEAEDED ASEGQPA