Gene BBta_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0051 
Symbol 
ID5153442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp52070 
End bp52486 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content57% 
IMG OID640555081 
ProductXRE family transcriptional regulator 
Protein accessionYP_001236260 
Protein GI148251675 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGA AAGCGCCCAA CCCTGTTGAC AAGCATGTTG GCAGCCGGGT GCGGATGCGC 
CGTATCATGT TGGGTATGAG CCAAGAAAAG CTTGGTGAGG CTCTCGGGCT TACTTTCCAA
CAGATCCAGA AGTACGAAAA AGGCACCAAT CGTGTCGGCG CTAGCCGTAT TCAGCAAATT
TCTGAGGTTC TGCAGATTCC GGTCTCCTTC CTGTTTGAAG GCGTCCCGAG CGGCAGCACC
AATGGCGAGC CCTTCGACGG CGCCTCTCCG GCCTATGTGT CAGATTTTCT GGCAACTTCC
GAAGGGCTGG CATTGACCCG CGCGTTCACG CGGATTCACG ACTCCAAGCT TCGTCGCAGC
ATCGTCGACC TTGTCGAGCA GATTGCTGAT CGCGAAGCGC CGGAAGATGA CGCCTGA
 
Protein sequence
MSTKAPNPVD KHVGSRVRMR RIMLGMSQEK LGEALGLTFQ QIQKYEKGTN RVGASRIQQI 
SEVLQIPVSF LFEGVPSGST NGEPFDGASP AYVSDFLATS EGLALTRAFT RIHDSKLRRS
IVDLVEQIAD REAPEDDA