Gene BBta_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0039 
Symbol 
ID5154459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp41799 
End bp42293 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content68% 
IMG OID640555069 
Producthypothetical protein 
Protein accessionYP_001236248 
Protein GI148251663 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.389129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGC AGCGGCAGAG CTACGATATC GGGCACACGC CGAAATGCCT GGTCGTGGTC 
GATGACAGTG CGGAATGCGA CCGCGCGATT CGCTATGCGG GGCGTTGGGC TGCGCGCGCG
GGCGGCGGCA TCGTGATGCT GCATGTCATC GAGACGGAGG ACCAGAACCA GCAATGGCTC
GGGGTCGCCG ATCTCATGCG CGCGGAAGCC CAGGACGAGG CCAATGCGGC GCTCGATCAG
GCCGCGACGC TGCTGTCGTC CATCGGCATC CAGGCACCGG ACCGGGTGAT CCGGGAAGGC
GATCCCACCA CGCAGATCCT GGCGACGGTG GAGGCCGATC GCGATATTGC GCTGCTCGTG
CTGGCGGCCA ATGCCGGCGC CGAAGGGCCG GGGCCGTTGG TGAGCCACGT CACCAAGACC
ATCGGCGCCT TCCCGGTGCC GTTGGTGATC GTGCCGGGCG ACCTCGCCGA CGCCGATATC
GACGCGCTGT CATAG
 
Protein sequence
MAVQRQSYDI GHTPKCLVVV DDSAECDRAI RYAGRWAARA GGGIVMLHVI ETEDQNQQWL 
GVADLMRAEA QDEANAALDQ AATLLSSIGI QAPDRVIREG DPTTQILATV EADRDIALLV
LAANAGAEGP GPLVSHVTKT IGAFPVPLVI VPGDLADADI DALS