Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0035 |
Symbol | |
ID | 5152623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 36589 |
End bp | 37782 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640555065 |
Product | putative beta-lactamase |
Protein accession | YP_001236244 |
Protein GI | 148251659 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.172625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.414753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAACA AGACCGATAT TGATCGCGGG TTGCGGCAGA GGGCCGAGGC CGGCGAGATT CCCGGCGTCG TCGCCGTCGC CGCGGACAGC AACGGCGTGA TCTACGAAGG CGCCTTCGGC AAGCGCGACC TCGGCCGCGA CGACCCGATG ACGACGGACA GCGTGTTCTG GATCGCGTCG ATGACCAAGG CGATCACCTG CGCCGCCGGA ATGCAGCTGG TCGAACAGGG ACGGCTGTCG CTGGACGCGC CGATCGGCGA GGTTCTCCCC GATCTTGCCG CGCCGAAGGT GCTGGACGGC TTCGACGCCC ATGGCGAGCC GATCCTGCGG CCGGCCAGGA CCGCGATCAC CTTGCGCCAT CTGATGACCC ATACCGCCGG GTTCTGCTAC GACATGTGGA ACGGCGACAT GGCGAGCTAT GTGCAGAAGG CCGGCACACC CGGCATCATC ACCTGCAAGA ACGACGCGCT GACGCTGCCG CTCGCCTCCG ACCCGGGCAC GCGCTGGGAA TATGGCATCA ACATCGACTT CGTCGGCAAG GCGGTGGAGG CCGTCAGCGG CGTGACGCTC GATCGCTACC TGCGCGACAA TCTGTTCGCT CCGCTCAGCA TGGATGATAC CGGCTTCAAG CTCGGCGCGT CGCAGCGCGC ACGGCTGGTC GGCATGCATG CCCGCGGCGA GGACGGTGCG CTGGCGCCGA TTCCGTTCGA GATCGAGCAG GAGCCGGAAT TCCACATGGG TGGCGGCGGA CTCTACGGCA CCGCCGGCGA CTACATCCGC TTCACCCGGA TGATCCTCAA CAACGGCCGC GGCAATGGCA ACCAGGTGCT GAAGCCGGAG ACGGTCGCAG CGATGCGCGA CAACCATATC GGCGAGTTGG AGATGACCAA GATGGCGGCG GCCGTGCCCG GGGTCACCAA TGACGTCGAT CTCTATCCGG ACATCGTCAA GAAATGGGGC CTGAGCTTCA TGATCACGAC GGCGCCGACA CCGGAGGGCC GCAGCGCCGG CAGCCTCGCC TGGGCCGGCC TCGCCAACAC ATATTACTGG ATCGATCCCG CGCGGGACGT CACCGGCGTA ATCCTGATGC AGCTGTTGCC GTTCGCAGAC CGGCTGTGCC TGGAGACCTT TGCCGGCTTC GAGCGCGCGG TCTATGCCGG CCTGGATGCC GCCGGCGGAC GGAAGGCCGC GTGA
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Protein sequence | MQNKTDIDRG LRQRAEAGEI PGVVAVAADS NGVIYEGAFG KRDLGRDDPM TTDSVFWIAS MTKAITCAAG MQLVEQGRLS LDAPIGEVLP DLAAPKVLDG FDAHGEPILR PARTAITLRH LMTHTAGFCY DMWNGDMASY VQKAGTPGII TCKNDALTLP LASDPGTRWE YGINIDFVGK AVEAVSGVTL DRYLRDNLFA PLSMDDTGFK LGASQRARLV GMHARGEDGA LAPIPFEIEQ EPEFHMGGGG LYGTAGDYIR FTRMILNNGR GNGNQVLKPE TVAAMRDNHI GELEMTKMAA AVPGVTNDVD LYPDIVKKWG LSFMITTAPT PEGRSAGSLA WAGLANTYYW IDPARDVTGV ILMQLLPFAD RLCLETFAGF ERAVYAGLDA AGGRKAA
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