Gene BBta_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0025 
Symbol 
ID5149344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp26671 
End bp27330 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID640555056 
Productputative haloacid dehalogenase-like hydrolase family protein 
Protein accessionYP_001236235 
Protein GI148251650 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.412211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.132054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCGA TCCATTCTGT ATTGCTCGAT CTCGACGGCA CGCTCATCGA CTCGCGTCCC 
GGCATCGCCG CGAGCACGCT GGCGGCCTTG CGGTCGCTGG GACACACGCC CGACGACACG
CTCGACGTCA CAGCCTTCAT CGGCCCGCCA TTGCAGGACA TGCTGCGTGT CCTACTGCAG
GCCCATGGCG GCGACCGTGT CGACGACGCC GTCGCCGCCT ATCGCCAGCA TTATGGTGAC
ACCGGCCTGT TCGACTGTGC GCTCTATCCC GGCATCCGCG ACGCGCTGCA GGCGATGCAC
GACGCCGGCC TGCGGCTCGC GACGTCGAAG CGCGAAATGT TCGCGCGGCG CATCCTGGAG
CATCTCGGCC TGGCATCGTA TTTCCGTGCC ATTCACGGCT CGGTGCCGTC AGGGGCGCTC
GACCACAAGC CCGAGCTGCT CGCACATATC CTCGCTGAGC GGAATATCGC GGCGCCCGAC
AGCCTCATGG TCGGCGACCG CCGCCATGAC GTCGCCGGCG CCCATGCTGT TCGCACGAGG
AGCCTCGGTG TGCTCTGGGG TTATGGCAGC CGCGACGAGC TCGAAGCCGC TGGCGCAGAC
CGCCTCGTGG AAAATCCCGC CGATCTCGCG GGCACCGTGC TGGCGATGCT GCGCCGATAG
 
Protein sequence
MSPIHSVLLD LDGTLIDSRP GIAASTLAAL RSLGHTPDDT LDVTAFIGPP LQDMLRVLLQ 
AHGGDRVDDA VAAYRQHYGD TGLFDCALYP GIRDALQAMH DAGLRLATSK REMFARRILE
HLGLASYFRA IHGSVPSGAL DHKPELLAHI LAERNIAAPD SLMVGDRRHD VAGAHAVRTR
SLGVLWGYGS RDELEAAGAD RLVENPADLA GTVLAMLRR