Gene BBta_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0007 
Symbol 
ID5156079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5840 
End bp8083 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content70% 
IMG OID640555039 
Producthypothetical protein 
Protein accessionYP_001236218 
Protein GI148251633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTCCAC GACCTAGCTG TCGTTGGATG ACACGCAGCT CCCGCCGGCG TGCTCCAAAG 
CCCGGCGCGC CCCGCGCCCG AACATGGTCC TGGAGATCTG TGATGACAGA GCTATGGCGG
CAGGCCATCG CCGGGCCGCG GCTGCGGCTG TTCGCATGCG GACTGTTGCT GCTCACGGGC
TGCGCCGTTC CCGCGCATGC CGATGACGCC ATCGTCGACG TGCACGGACT CCCGCGGCTC
GACGGCGCGG TCGAGGACAC GTCGCGTCCC GACCGCTACC GCGTCGTCTA CCGGGTCCCG
ATGCTGGCCG CGGCAGCGAA CCCGGCGACA CAGCAGCTGC TCGCTGCCGA CGGTTGGGTG
CGCTACGTCC GCCCGCTCGA TGAGCGCAGC GCCCTGCTCA ACTACAAAAA GGGCAAGCAG
GGACTGACGG TCTACTTGAG CGGAAGCGCC GGCCATCCCG GCCAGTCGGA CGTGACCTAC
TCGCCGCAGC GCATCTACGC CGACCTGCCG TTTGCCGACG GGGCCGTTGA CCTCGTATTC
GACGAGACGC GGCCGTATCT GTCCTGCGTC GTGCCGATGG CGCTCGACGC GGCGAAGGCC
CTCTACGCCA AGGACATGAT CGCAATCGGC TGGAAGCCGC TCGCGCCGGA GGCCGCCGCG
CGCTGGCCGA ATGCCGATCT GAGCGAGACC ATGCCGGGCG GCGTGCGAGC CTTCTACGGC
CGTGACGACA ACGACGGCTC TCGCCGCCAG AGCCCGGTGA TGCTGACGCT GACCCGGCGC
GACGACGGCA GGACCAATGT CGAGGTCCGG GTTGCGCCGT TCGCGCTTCC CGCCGAACTC
GAGGCTGGTG AGGAGCGGGC GGGCCTGCCG ATGCCAAAGC CGACGAAGTG GTCGCAGAGT
CTCGGCGGCG CGACGTCGCC GAGCCGCCAG GCCAAGGGCG CCGTGATCGC CGAGCTGCCG
GCCGTACTTG CCTTCTACAC GCGCGAGCTG CCGGCACGCG GCTGGCGGAT CGAGGCGGCC
GCACCGGGCA CGGCGAACGA CGTGACGCTG AAGGTGGCCT CTGCCGAGGA GACCGGAACC
TTGAGGCTGT CGCGCAACTA CGATCTCACC ATGGTCGAGC TGTCGGTGCG CGCCACCGAG
GCGGCGCTGG CCGCGCGCGC CAAGGCCAAG AAGGACGCCG ACGACAGGTT CATGGCCGAT
GCCGCCGCGA TGGCCAAGCA GGTGATCGCC GCCGACGAGG CGCGCCGCAG CGCGCAGGTC
GGCGCCATGT CGGACGCGCC GCTGAAGGCG CTGGCCGGCA ATCCTGCGCC GATCCCGCTG
CCCGAGACCG CCGAGGCAGT GGAGTTCGAC GGTAGCCAGG GACGGCTGGA GTTCAAGTCG
ACCTCATCGG TGCGGGCGCT CACCGGCTTC TACCGCGCGA CCCTGAAGCC TGCCGGCTGG
AAGGAGGCGC CGACCGTGAT CGACAATCCG ACCATGGCGC GGCTGGAGTT CTCCACGAAA
GGCAAGGCGG TCGCGTTCAC GATCATGCAG ATGGGCCCCA AGGTGAACGT GACGGCCGAC
GGTACTGGTC TCGTCGCGGC CGCCGGGCCG ACGGCCGCCG CGCAGCCCGC CCCGGCTGCC
GCGCCGCTCG AGGCTGATCC CAGCTCGGCC CTGCCGGTCC CGAAGGAGCG CAGCGCGACC
TCGATGGGCC GCTCCAAGGC GCCGGGCATC GACACGCCGG TGCGGCTCGA GCTCGAAGCG
AGCGTGCCGG CAGAGCTGAA AGCCGTCGTA GCGTTCTACC GTAGCGAGTT GGCCAAGCTC
GGCTGGCAGG AGACGCCGCA GAGCGCGCAG ATCAGCGTCG ACAGCGCCCG GCTCGCCTTC
GCCTCGCCGC AGGGGCCGGC CGTGCTGACA CTGGGCCGCG CGAGAGGCGA GACCTCGGTC
AACCTGGTGC AGAAGAACGC GGACGCCGCG GCCAAGGCCG AGATCCTGCC CAAGCCGGGA
CAGTCCAAGC TGATGCTCGG CAATGTCGGT GACGCCGACG CCGTGCTGAC GATCAACAAG
CAGACGGTGA AGATCGCGGC CGGCATCGGC AGCCCGAAGA CGCCCAAGGG CCCGCTGCTC
GATCTGCCGC CGGGAAAATA CCGCTACGAG ATCAAGATCG CAGGCCGCGC GCCCGTCAGC
GATACGATCG CGCTCGGCGC CGGCGATACC TGGGGCCTGA TGGTCGGCCC GACCGGCCGG
GCCCTCCCGC TGCCGCTGTA CTGA
 
Protein sequence
MSPRPSCRWM TRSSRRRAPK PGAPRARTWS WRSVMTELWR QAIAGPRLRL FACGLLLLTG 
CAVPAHADDA IVDVHGLPRL DGAVEDTSRP DRYRVVYRVP MLAAAANPAT QQLLAADGWV
RYVRPLDERS ALLNYKKGKQ GLTVYLSGSA GHPGQSDVTY SPQRIYADLP FADGAVDLVF
DETRPYLSCV VPMALDAAKA LYAKDMIAIG WKPLAPEAAA RWPNADLSET MPGGVRAFYG
RDDNDGSRRQ SPVMLTLTRR DDGRTNVEVR VAPFALPAEL EAGEERAGLP MPKPTKWSQS
LGGATSPSRQ AKGAVIAELP AVLAFYTREL PARGWRIEAA APGTANDVTL KVASAEETGT
LRLSRNYDLT MVELSVRATE AALAARAKAK KDADDRFMAD AAAMAKQVIA ADEARRSAQV
GAMSDAPLKA LAGNPAPIPL PETAEAVEFD GSQGRLEFKS TSSVRALTGF YRATLKPAGW
KEAPTVIDNP TMARLEFSTK GKAVAFTIMQ MGPKVNVTAD GTGLVAAAGP TAAAQPAPAA
APLEADPSSA LPVPKERSAT SMGRSKAPGI DTPVRLELEA SVPAELKAVV AFYRSELAKL
GWQETPQSAQ ISVDSARLAF ASPQGPAVLT LGRARGETSV NLVQKNADAA AKAEILPKPG
QSKLMLGNVG DADAVLTINK QTVKIAAGIG SPKTPKGPLL DLPPGKYRYE IKIAGRAPVS
DTIALGAGDT WGLMVGPTGR ALPLPLY