Gene BBta_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0003 
Symbol 
ID5149652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3484 
End bp3771 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content56% 
IMG OID640555035 
Productexcinuclease ABC subunit C 
Protein accessionYP_001236214 
Protein GI148251629 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.164369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACT GGGTGTACAT ACTCGCCAGC AAGCCCGGCG GCACGCTTTA TATCGGCGTG 
ACCAACGATC TTATTCGGCG CGTCTATGAG CACCGCGAAG GTCTCGCCGA GAGTTCCACC
AGACGCTACG GCATCAAGCG GCGGGTCTAT TTCGAGGCGC ATGAGACGAT CGCCGCAGCA
TTGCAGCGTG AGAAGAACAT CAAGCACTGG TCACGTGAAT GGAAGATCGA CCTCATCGTC
GCGAGTAATC CGGACTGGCG CGATCTTTAT GATGAAATAG TCCGCTGA
 
Protein sequence
MANWVYILAS KPGGTLYIGV TNDLIRRVYE HREGLAESST RRYGIKRRVY FEAHETIAAA 
LQREKNIKHW SREWKIDLIV ASNPDWRDLY DEIVR