Gene Acry_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3103 
Symbol 
ID5161292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp3387347 
End bp3388531 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content66% 
IMG OID640555031 
ProductO-succinylhomoserine sulfhydrylase 
Protein accessionYP_001236210 
Protein GI148262083 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01325] O-succinylhomoserine sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCAC GCATCTATCG TCCCGCGACC AACCTGGTTC ATGCTGGCCA GGTCAGGTCC 
AACTTCGCCG AGAACGCCGA AGCGCTCTAC CTCACCTCCG GCTTCGTCTA CGATAATGCC
GAGCAGGCGG AAGCGACCTT CAAGGGTGAG ATCTCCCATT ATCAGTATTC ACGCTTCGGC
AACCCGACCG TGAGCATGCT GGAGGCCCGG CTCGCGACCC TGGAGGGGGC GGAAGCCTGC
CGTGCCACGG CGACGGGAAT GGCCGCGGTC AATGCCGCCC TGCTCGCCCA TCTCAAGGCG
GGAGACCGCG TGGTCGCCTC GCGCGCGCTG TTCGGCTCGT GCTCGTGGAT CGTCTCCACG
CTGCTGCCGC GCTACGGGAT CGAGAGCGTC TTCGTCGATG GCGGCGACCT TGCGGCGTGG
GAGGCCGCGC TGGCGCCGGG AGCGGCGCTG GTGCTGCTCG AAACCCCGTC GAACCCGATG
CTCGAGATCA TCGACATGCG GGCCGTGGCG GATCTTGCTC ACAAGGCCGG CGCGATCGTG
GTGGTCGATA ACGTTTTCGC GACCCCGCTG CTGCAGCGGC CGCTTGAATT CGGCGCTGAT
GTGGTGGTCT ATTCCGCGAC GAAGCACATG GACGGCCAGG GCCGCGTGCT CGGCGGCGCC
GTGCTTGGCG GCAAGGACTG GATCGACAAC ACGCTCCAGC CCTTCACCCG CAATACCGGC
CCGGCGATCT CGCCGTTCAA TGCCTGGGTG ATCCTGAAGG GGCTGGAGAC AATGGCGCTC
CGCGTCGGCC AGGCCTCGCG TTCGGCCGCC GCCATCGCCG ACCATCTTGC CGGCCAGCGG
CAGGTCATCC GCGCGCTCTA CCCTTTCCGG GCCGATCATC CGCAGGTCGA TCTCGCAAGG
CAGCAGATGA GTGCCGGCGG CACACTCGTG ACCTTTGAAC TCGACGGCGG CAAGGACGCG
GCGTTCCGCT TCATGAACGC GCTCGAGCTC ATTGCGATTT CCAACAATCT CGGTGACTCG
AAATCGATGG TGACGCACCC GGAAACCACC ACCCATTCGC GCATCGCGCC GGCCGAGCGG
GCGCGCCTCG GGATCAATGG CGGCACGATC CGCTTCTCGG TGGGGCTCGA GGATGTCGCC
GACCTGATTG ATGACCTTGA TCGGGCGCTG GCGGCGCTGA AATGA
 
Protein sequence
MTSRIYRPAT NLVHAGQVRS NFAENAEALY LTSGFVYDNA EQAEATFKGE ISHYQYSRFG 
NPTVSMLEAR LATLEGAEAC RATATGMAAV NAALLAHLKA GDRVVASRAL FGSCSWIVST
LLPRYGIESV FVDGGDLAAW EAALAPGAAL VLLETPSNPM LEIIDMRAVA DLAHKAGAIV
VVDNVFATPL LQRPLEFGAD VVVYSATKHM DGQGRVLGGA VLGGKDWIDN TLQPFTRNTG
PAISPFNAWV ILKGLETMAL RVGQASRSAA AIADHLAGQR QVIRALYPFR ADHPQVDLAR
QQMSAGGTLV TFELDGGKDA AFRFMNALEL IAISNNLGDS KSMVTHPETT THSRIAPAER
ARLGINGGTI RFSVGLEDVA DLIDDLDRAL AALK