| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3091 |
|---|
| Symbol | |
|---|
| ID | 5160856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 3374391 |
|---|
| End bp | 3375191 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640555019 |
|---|
| Product | CarD family transcriptional regulator |
|---|
| Protein accession | YP_001236198 |
|---|
| Protein GI | 148262071 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAC CCGCTTCAAC CGATCCGGCC GGAGCCGGTG CGGACGTCAG AAGCAGTGCC
AAGGCGACGA CCCGCGCGAA GACGGCCATG AAGGCCGCCG CCGCGTCCGG CTCGCCGTCC
GACAGCCCGG CGCCGCGCCG CGCCGCCAGA ACCGCCGCCG AACCCCAGGC GGCCAAGACC
GAGAAGGACT CACAGCCCGA TATGGCCAGC CCGAATACCG CCCAGACCGC CCCCCAGCCC
GCCGAAGCCG AACGCGACAC CCTGCCGCCG CCAGGGCCGC GCCCCGTGCT GCCGCAGCGC
GCGATCGCCA AGGCCGAGAC CTTCAAGCCC GGCGATCACG TCGTCTACCC GACCCATGGC
GTGGGCAAGG TGGAGCGCAT CGCCGCCGAG GAGATTGCCG GACAGAAGCT GGAACTGATC
CACATCACCT TCGATGAGAA CCGCATGACG CTGCGTGTGC CGGTAAACAA GGCGCGCACG
GCGGGTCTGC GCAAGCTCTC CAGCCGCAAG CAGTTCGACG AGGTGCTCGC CACCCTCAAG
GGCCGCGCCC GGGTGAAGCG CACCATGTGG TCGCGCCGGG CGCAGGAATA CGAGGCGAAG
ATCAATTCCG GCGACCCGAT GGCGATTGCC GAGGTGGTGC GCGACCTGCA CCGCAATGCC
GGCCAGCCGG ACCAGAGCTT CTCCGAACGG CAGATCTTCG AGCAGGCGCT CGACCGGCTT
GCCGCCGAAT ACGGCGCGCT CGAGGGGCTC GACAAGCAGG GCGCCATCGA CAAGCTGCTC
GACTTCCTGA AGACCGAGTG A
|
|---|
| Protein sequence | MKRPASTDPA GAGADVRSSA KATTRAKTAM KAAAASGSPS DSPAPRRAAR TAAEPQAAKT
EKDSQPDMAS PNTAQTAPQP AEAERDTLPP PGPRPVLPQR AIAKAETFKP GDHVVYPTHG
VGKVERIAAE EIAGQKLELI HITFDENRMT LRVPVNKART AGLRKLSSRK QFDEVLATLK
GRARVKRTMW SRRAQEYEAK INSGDPMAIA EVVRDLHRNA GQPDQSFSER QIFEQALDRL
AAEYGALEGL DKQGAIDKLL DFLKTE
|
|---|
| |