| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2616 |
|---|
| Symbol | |
|---|
| ID | 5161328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 2868501 |
|---|
| End bp | 2869502 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640554541 |
|---|
| Product | dihydroxyacetone kinase subunit DhaK |
|---|
| Protein accession | YP_001235726 |
|---|
| Protein GI | 148261599 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2376] Dihydroxyacetone kinase |
|---|
| TIGRFAM ID | [TIGR02363] dihydroxyacetone kinase, DhaK subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0611237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TCATCAACGC GCCGGAAAAC GTGGTGGCCG AGGCGCTGGC CGGCATGGCC
GCCGCGCATC CCGATCTGAT CCGCGTCCAC ACCGATCCCG ATTTCATCAC CCGCGCCGAT
GCCCCGGTGC GCGGCAAGGT GGCGCTGCTC TCCGGCGGTG GCTCCGGTCA CGAGCCGATG
CATGGCGGTT TCGTCGGCCG CGGCATGCTC GATGCCGCCT GCCCCGGCGC GGTCTTCACC
AGCCCGACGC CGGACCAGAT GCTCGCCGCC ACCAGGGCGG TCGATGGCGG CGCCGGCGTG
CTGCACATCG TGAAGAACTA CACCGGCGAC GTGCTGAACT TCGAGATGGC CGCCGACCTC
GCGAAGGAGG AGGGGCTCGA CGTCGCCGCC GTCGTGATCG ATGACGATGT GGCGGTGCAG
GACAGTCTCT ACACCGCCGG CCGCCGCGGC GTCGGCGCCA CGATCCTCGC CGAGAAGATC
TGCGGCGGTG CCGCCGAGGC CGGCGCCGAC CTCGCCAGCG TCGCCGCCCT CTGCCGCGAG
GTGAACGGCG CCGCCCGCTC GATGGGCGTC GCGCTCAGCC CCTGCACCGT GCCGCATGCC
GGCAAGCCGA GCTTCACCCT CGGCGAGGGC GAGATGGAAT ACGGCATCGG CATCCATGGC
GAGCCCGGCC GCAAGCGCAT CCCCATCGAA CCGGCCGACC GTGTGGCCGA AATGCTGATG
GAACCCATCC TCGCCGACCT GCCGTTCCGC CAGGGCGACA AGGTGCTGCT CTTCGTCAAC
GGCCTCGGCG GCACGCCGCT GGTCGAGCTC TACATCCTCT ACCGCAAGGC CGCGGAGATC
GCCCGACGCC ACGGGCTGAC GGTCGCGCGC TCGCTGGTCG GCCCCTACAT GACCAGCCTC
GAGATGGCCG GCACCTCGAT CACCCTGCTG CGCCTGACCG ACGACATGAT CCGTCATTGG
GACGCGCCGG TCGTCACCCC GGCGCTGCGC TGGGGCGCCT GA
|
|---|
| Protein sequence | MKKFINAPEN VVAEALAGMA AAHPDLIRVH TDPDFITRAD APVRGKVALL SGGGSGHEPM
HGGFVGRGML DAACPGAVFT SPTPDQMLAA TRAVDGGAGV LHIVKNYTGD VLNFEMAADL
AKEEGLDVAA VVIDDDVAVQ DSLYTAGRRG VGATILAEKI CGGAAEAGAD LASVAALCRE
VNGAARSMGV ALSPCTVPHA GKPSFTLGEG EMEYGIGIHG EPGRKRIPIE PADRVAEMLM
EPILADLPFR QGDKVLLFVN GLGGTPLVEL YILYRKAAEI ARRHGLTVAR SLVGPYMTSL
EMAGTSITLL RLTDDMIRHW DAPVVTPALR WGA
|
|---|
| |