| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2216 |
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| Symbol | |
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| ID | 5160148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 2449820 |
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| End bp | 2450857 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640554138 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001235333 |
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| Protein GI | 148261206 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000045016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATTT TCAGGAGCGC TTCGGCGCTT GGCGCGATGG CGGCCGTCTT GAGCTTCGTG
GGAGTCGCGC GGGCGGCGCC GGCCCTGGAT ACGGCAAAAA TGACCCAGAT GCAGTCGAAG
GCGGTGTGCG TGAATCCGCA CCCTACGCAT GTCAATTTGT CGAAGCTCGT AGTCGGATTC
AGCCAGTCTG AATCGAATGC CAATCCGTTC CGAGCCGGTG AGACCAAGTC GGTCCGGGAT
GCGGCGAAAG CGTTTCATGT CCGCCGGCTG ATCTATACAA ACGCGCATAG CAACCAGTCG
CGCCAGGTCG CCGATGTCGA GAACATGATC AACCAAGGCG CGCAGGCGCT GATCATCGCG
CCGCTGGATT CGACCGGCTT GCAACCGGCT TTCGCGCAGG CCGCAGCCAA GCACATTCCC
ATCCTCACCC TCGACCGGCG GACCGCGGGC TCGAAGTGCA GCGATTATCT GAGCTTCCTG
GGCTCCAACT TCTATTTCAA GCAAGGCGAG ATCGACGCGC GAGAACTAGC GAAGGCGACC
GGCGGCCACG CGATGGTGGC GGAGATTCAG GGCGCCTACG GCAATTCGGT GGAGGTGGCG
CGCACCAAGG GCTTCGCCGC TGGGCTCAAA GCCTATCCTG GCATGAAGAT CGTCACCGAG
CAGACCGGTA ACTGGTTCAC CACCGACGCG CAGAAGGTGA TGAGCCAGAT TCTGCTCGCG
CATCCGAATG TGAATGCGGT CTATGCCCAA GCGGATACGA TGGCGTTCGG CGCGATCACC
GCGCTGCGCG ACGCCGGCAA GAAGCCGGGA CAGGTCAAGA TCGTGTCGAT CGACGGCACC
CGGCAGGGGG TTCAGGACAT CGTTGACGGC TGGATCTATG CCGATGACGA AACCAATCCG
CGCTTCGGGC CGATCGCGTT TCACGAGCTG CAGAACTGGT TCGACGGTAA GCCGGTGCCG
CGGCACATCG TGCTGACGGA TCATATCTAC ACCCCGGCGA ATGCAGCGGC GGCGCTGAAG
AACAACGTGC CGTTCTAA
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| Protein sequence | MMIFRSASAL GAMAAVLSFV GVARAAPALD TAKMTQMQSK AVCVNPHPTH VNLSKLVVGF
SQSESNANPF RAGETKSVRD AAKAFHVRRL IYTNAHSNQS RQVADVENMI NQGAQALIIA
PLDSTGLQPA FAQAAAKHIP ILTLDRRTAG SKCSDYLSFL GSNFYFKQGE IDARELAKAT
GGHAMVAEIQ GAYGNSVEVA RTKGFAAGLK AYPGMKIVTE QTGNWFTTDA QKVMSQILLA
HPNVNAVYAQ ADTMAFGAIT ALRDAGKKPG QVKIVSIDGT RQGVQDIVDG WIYADDETNP
RFGPIAFHEL QNWFDGKPVP RHIVLTDHIY TPANAAAALK NNVPF
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