Gene Acry_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1945 
SymbolrplD 
ID5160747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp2131294 
End bp2131944 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID640553866 
Product50S ribosomal protein L4 
Protein accessionYP_001235065 
Protein GI148260938 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCG ACATTTCAAC CCTCGATGCC GGCTCGGCCG GCAAGGCCGA GCTGCCCGAG 
GAATATTTCG CCGCCACGCC GCGCGCCGAC ATCATGGCCC GCGTGGTGCA CTGGCAGCTC 
GCGAAGCGCC GTGCCGGCAC CCACAAGGTG AAGGGCATGG GCGAGGTCAG CGGCACGACG 
AAGAAGCCGT ATCGCCAGAA GGGCACCGGC AACGCCCGCC AGGGCTCGCT GCGCGCGCCG 
CAGTTCCGCA CCGGCGGCGC CGTGCACGGC CCGGTCGTTC GCGATCATGG CTATTCGCTG 
AACAAGAAGG TCCGCCGTCT CGGCCTGATC TCGGCGCTGT CGCAGAAGCT GGCCGAGGGC 
AAGCTGGTCG TGCTCGACAC GGTCGCCGGC GTCTCGAAGA CGAGCGAACT GAACGTCAAG 
CTGAAGAAGC TCGGCTGGGG CCGCACGCTG GTGGTGGATG CGGTGGTGGA CGAGGGCTTC 
GCCCGCGCCA GCCGCAATCT GATCGGGATC GACGTGCTGC CGGTCGTCGG CGCCAACGTC 
TACGACATCC TCCAGCACGA CACGCTGGCG ATCACCGCCG CCGGGCTCGA GGGACTGAAG 
CGGCGTCTTG ACGGCATCAA GGCCGGCGCC AACGAGGAGA TCGCGGCATG A
 
Protein sequence
MQIDISTLDA GSAGKAELPE EYFAATPRAD IMARVVHWQL AKRRAGTHKV KGMGEVSGTT 
KKPYRQKGTG NARQGSLRAP QFRTGGAVHG PVVRDHGYSL NKKVRRLGLI SALSQKLAEG 
KLVVLDTVAG VSKTSELNVK LKKLGWGRTL VVDAVVDEGF ARASRNLIGI DVLPVVGANV 
YDILQHDTLA ITAAGLEGLK RRLDGIKAGA NEEIAA