Gene Acry_1907 details

Gene Information

• Locus tag: Acry_1907
• Symbol: smpB
• ID: 5160775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 2104939
• End bp: 2105418
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640553828
• Product: SsrA-binding protein
• Protein accession: YP_001235027
• Protein GI: 148260900
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.45258
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGAGC CCCGGAAATC CGGGCTGATC TCCCACGGGA TCGCGGCGCA GAACCGCAAG 
GCCCGGTTCA ACTACACGAT CAAGGACACG GTCGAGGCGG GCATCGTCCT GCGCGGCGCC 
GAGGTGAAGT CGCTGCGCAT GGGCCGCGCC ACGCTGTCCG AGGCCTTCGC CGGCGAGCGC 
GACGGCGAGA TGTATCTCTT CAACATGTAC ATCCCCGAAT ACCAGGGCGG CGTGCTCTCC 
CGCTTCGACA CCAAGGGCCC GCGCAAGCTG CTGCTCAAGC GCAAGCAGAT CGACCAGCTC 
CTCGGCGCCA TCGCCCGCCA GGGCTCGACC GTCGTCCCGC TCGACGTGCA TTTCAACCCG 
CGCGGCCTCG CCAAGGTCAC GCTCGGCATC GCCGAGGGCC GCAAGCAGCA CGACAAGCGC 
CAGGCCATCG CCAAGCGCGA CTGGGAACGC GACAAGGCCC GCATCCTCAA GAACCGCTGA 

 

Protein sequence

MAEPRKSGLI SHGIAAQNRK ARFNYTIKDT VEAGIVLRGA EVKSLRMGRA TLSEAFAGER 
DGEMYLFNMY IPEYQGGVLS RFDTKGPRKL LLKRKQIDQL LGAIARQGST VVPLDVHFNP 
RGLAKVTLGI AEGRKQHDKR QAIAKRDWER DKARILKNR