| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1849 |
|---|
| Symbol | |
|---|
| ID | 5160246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2038873 |
|---|
| End bp | 2039577 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640553771 |
|---|
| Product | protocatechuate 3,4-dioxygenase, beta subunit |
|---|
| Protein accession | YP_001234970 |
|---|
| Protein GI | 148260843 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGA CCGAAGCCGA CGGGATCGCG CCGTCGCGCA GCGCGCAGCC GCCGCTCTCG
GCGCCGGATT ATCGCAGCAC GGCGCTGCGC GCGCCGCGCG AGATGCCGGT GGCGATTCCG
CAGACGCTGA CCGAGACGAC CGGGCCGGTC TTCGAGCCGT CGCGCTTCGC GCCGACCGAC
AATCTCGCCG TGAATGACGG GCACGAGGCG ATGGGCGAGC GGATCATCGT CACCGGGCGG
GTGCTGGACG AGGCCGGGCG GCCGGTGCCG CGCAGCATGG TCGAGATCTG GCAGGCGAAT
GCCGCGGGGC GCTACAACCA CAAGGGCGAT ACGCATGACG CGCCGCTCGA CCCGCATTTC
CGCGGCGCCG GGCGCGTGTT CACCGATGAC GAGGGGCGCT ACCGCTTCGT TACGGTCAAG
CCGGGCGCCT ATCCCTGGGG GAACCACGCC AATGCGTGGC GGCCGAATCA CATCCATTTC
TCGCTGTTCG GCGCCGGGTT CGCCGCGCGC CTGATCACGC AGATGTATTT CCCCGGCGAC
CCGTTGCTTG AACTCGACCC GATCTTCCAC GCGGTGCCGG ACGCGGCGGC GCGGGCGCGG
CTGGTGGCGG CGTTCGATAT CGGCGTCACC GAGCCGGGGC GGGCGCTCGG CTATCGGTTC
GACATCGTGC TGCGCGGCCG CGCCGCCACG CCGATGGAGG GGTGA
|
|---|
| Protein sequence | MNETEADGIA PSRSAQPPLS APDYRSTALR APREMPVAIP QTLTETTGPV FEPSRFAPTD
NLAVNDGHEA MGERIIVTGR VLDEAGRPVP RSMVEIWQAN AAGRYNHKGD THDAPLDPHF
RGAGRVFTDD EGRYRFVTVK PGAYPWGNHA NAWRPNHIHF SLFGAGFAAR LITQMYFPGD
PLLELDPIFH AVPDAAARAR LVAAFDIGVT EPGRALGYRF DIVLRGRAAT PMEG
|
|---|
| |