Gene Acry_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1717 
Symbol 
ID5161283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp1899595 
End bp1900638 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID640553633 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001234840 
Protein GI148260713 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.806069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTATA AAGTTGCAGT TGTCGGGGCC ACCGGGGCGG TCGGGCGCGA GATGCTCAAG 
ACGCTCGCGG AGCGGAACTT TCCCGCCTCC GAGGTGATCG CCCTCGCCTC CCCGCGCTCG 
GCGGGACAGC AGGTGAGCTT CGGCGACGAG GCGATCCTCA CCGTGAAGAA CCTGGAGACC 
TTCGATTTCC GCGGGGTGGA TTTCGGCCTG TTCTCGCCGG GCGCCTCGAT CTCGGCGGTG 
CACGCGCCGC GCGCGGCCGA GGCGGGGTGC ATCGTGATCG ACAATACCAG CCATTTCCGC 
ATGGAGCCGG ACGTGCCGCT GGTGGTGCCG GAGGTGAACA CCCACGCGCT GGAAGCCTTC 
ATGGCGAAGC CGGACTGGCG GCGGATCATC GCCAATCCGA ACTGCTCGAC GATCCAGATG 
GTGGTGGCGC TGAAGCCGCT GCACGAGAAA TTCGGCATCC GCCGCGTGTC GGTCGCGACC 
TACCAGTCGG TCTCCGGCGC GGGCAAGGAG GGCATGGACG AGCTGGAGCG CGCGACCAAG 
GCCACCTATG TCCACGAGAC GACGAAGCCG GAAGTCTTCA CCAAGCCGAT CGCCTTCAAC 
GTGATCCCGC ATATCGACGT GTTCATGAAG GACGGGGCGA CCAAGGAAGA GTGGAAGATG 
ACGGTCGAGA CCCGCAAGAT CCTCGACCCC GATATCGCGG TGTTCGCGAC CTGCGTGCGG 
GTGCCGGTGT TCATCGGCCA TGGCGAGGCG GTGCATGTCG AGTTCGCCAA CCCGGCCCCG 
CTGGAGGCGG CAAGGGCGGC GCTGCGCGCG GCCCCGGGCG TGACGCTGTT CGACGAGCGC 
GAGGATGGCG GCTACGTCAC CCCGCTGGAA TGCCAGGGCG AGGATGCCGT CTATGTGTCG 
CGGCTGCGGG TCGATCCCAC GGTGCCGCAC GGGCTCGGCT TCTGGTGCGT TTCGGACAAT 
CTGCGCAAGG GCGCGGCGCT GAACGCGGTG CAGATCGCCG AGACGATCGT CAAGCGCGGG 
CTGATCGGCA AGAAGGCCGC CTGA
 
Protein sequence
MAYKVAVVGA TGAVGREMLK TLAERNFPAS EVIALASPRS AGQQVSFGDE AILTVKNLET 
FDFRGVDFGL FSPGASISAV HAPRAAEAGC IVIDNTSHFR MEPDVPLVVP EVNTHALEAF 
MAKPDWRRII ANPNCSTIQM VVALKPLHEK FGIRRVSVAT YQSVSGAGKE GMDELERATK 
ATYVHETTKP EVFTKPIAFN VIPHIDVFMK DGATKEEWKM TVETRKILDP DIAVFATCVR 
VPVFIGHGEA VHVEFANPAP LEAARAALRA APGVTLFDER EDGGYVTPLE CQGEDAVYVS 
RLRVDPTVPH GLGFWCVSDN LRKGAALNAV QIAETIVKRG LIGKKAA