Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1530 |
Symbol | |
ID | 5160777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 1691636 |
End bp | 1693570 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640553445 |
Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
Protein accession | YP_001234657 |
Protein GI | 148260530 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.320079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCA GATTTGGGAC ACTAGGAAAT TTCGGATTGC CAAATCCGCA CCACTGGCCG GCCTGTCGCC GCCGAAGTGA GCCGTGCCTG TTCAAGTCCG GCGCGGGCAT TGGCAAGCAC GGTGGCTGGA TCGTCGCCCG AACGCGCCCA GCGCGACGCG ATGCCGATGG CCGCATGACG GCCGGTGCCG GCCAGCATCG CATCAAGCCT TGCCACGATC CGGTCGCCAC GCTCGGCCGC AATCAGGTGA TCGACGCCGT CACACCAGGC GGCAAGCCGG GTCGGCCCGA TCCGGCCGAT CAGGTCGCTC GGCCGCAGCA TGTCACGCAG CGTTTCCGCC GATTCGCGAA TGACCGCCGA AGACGCCTCG GAGCCCGTCG CGCCGCCCGA CTTTACCCAG CCAATGGCGA ACATGGTGCC AACCCGCTCC TCGATATCGA GCCGGTCAAA CCGCCGATCG GCCTGCGCAA GAAAACTCGG CAACGGCCAC AAGCCCGTTT CGGGGTCGAG CGCATTACGC TTGCCACCAC CGGCGACATC GAGCAGGCGC ACGACGAGCG TGCGCAGATG CGGGCCGATC GCGGTCAGAA GTTCCGTTTC CGCTGCGGTG AACCGCCTGT CTCCCGGGCT GCGCCATGCC AGGAGCGCGG CGCTGACCGA TCGTCCGGCC GTCACGTTGC CGAGATCGAC CGGAATGGTG ATCGATTCGC CCCCCGGCAT GTCGGCAAGG CCGATGCCGT AGGGGTAATC GGCCAGAACG GTCTCGGCTC CCGTCAGCGG CGGGACCGGA CGAGCGACAA TACAGACGCC CGAATCGGCG AATTCCGCTG CCAGCAGGGC GCAGGCGGCC GAGCCGGCGG TCGCCGCATC CGGCAATCCG GCCAGGCTTT CGATCATGCG CACCAGGCGG TCGAAGCGCT CCGCATTTCC GCCGCCTGCC GAACCGGCAT TCGCATACGA GTCCGTCGAA AAATCTGCCC GATTCGTCAT GGATGCGTTT TCGCAGGATC AGGTAAACAA CGGATTACCA CCGGATTGAC AGGCGCGACC CTGCTCAGCA TGGTCGCGCC CACACAAGAT ACGGAACGCC TGCCGATGGA CCACACGCAA CTCGCCGCCG CCGTCACCGC CGCCTGGGAA CGCCGCGACC AGCTCAGTCC GGCCTATCAG GGATCCGACC GGGAGGCCGT CAGCGATGCG CTCGCCCGTC TCGATCGGGG CGAACTGAGG GTTGCCGAGC CCGGCCCGGG CGGCTGGGTC GTCCATCAAT GGCTCAAGCA GGCGATCCTC ATGTCCTTCC GCCTGCTGCC CAACCGCACC ATGCCGGGCG CCGGCGGCGC GCCCGTGTTC GACAAGGTCC CGATGAAGTT CGGCGACTGG GACGATGCGC GCTTCGCCGC CGCTGGCATC CGCGCGGTGC CCGGCGCCGT CGTCCGCCAT TCGGCGCATG TCGGCCGCAA TACCGTGCTG ATGCCCTGTT TCATCAATGT CGGCGCCCGG GTCGGCGAGG ACACGATGAT CGATACCTGG TCCACGGTGG GCTCCTGCGC GCAGGTTGGC CGCAACTGCC ACATCAGCGG CGGCGTGGGA ATCGGCGGCG TGCTCGAGCC GCTGCAGGCC AACCCCGTGA TCATCGAGGA CGACTGCTTC ATCGGCGCCC GCTCCGAAGT TGCCGAAGGC GTGATCGTGG AGCGCGGCGC CGTGCTCTCC ATGGGCGTGT TCCTCGGCGC CTCCACCCGA ATCGTCGACC GGACGACCGG CGAAGTGATC TATGGCCGCG TGCCGGCCTA TTCCGTCGTC GTGCCGGGCA CCATGCCCGG CAAGCCGCTG CCGGACGGAA CTCCGGGCCC GTCCCTCGCC TGCGCCGTGA TCGTCAAGCG GGTCGACGCC CAGACACGGT CGAAGACCGC GATCAACGAG TTGCTGCGGG CGTGA
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Protein sequence | MDFRFGTLGN FGLPNPHHWP ACRRRSEPCL FKSGAGIGKH GGWIVARTRP ARRDADGRMT AGAGQHRIKP CHDPVATLGR NQVIDAVTPG GKPGRPDPAD QVARPQHVTQ RFRRFANDRR RRLGARRAAR LYPANGEHGA NPLLDIEPVK PPIGLRKKTR QRPQARFGVE RITLATTGDI EQAHDERAQM RADRGQKFRF RCGEPPVSRA APCQERGADR SSGRHVAEID RNGDRFAPRH VGKADAVGVI GQNGLGSRQR RDRTSDNTDA RIGEFRCQQG AGGRAGGRRI RQSGQAFDHA HQAVEALRIS AACRTGIRIR VRRKICPIRH GCVFAGSGKQ RITTGLTGAT LLSMVAPTQD TERLPMDHTQ LAAAVTAAWE RRDQLSPAYQ GSDREAVSDA LARLDRGELR VAEPGPGGWV VHQWLKQAIL MSFRLLPNRT MPGAGGAPVF DKVPMKFGDW DDARFAAAGI RAVPGAVVRH SAHVGRNTVL MPCFINVGAR VGEDTMIDTW STVGSCAQVG RNCHISGGVG IGGVLEPLQA NPVIIEDDCF IGARSEVAEG VIVERGAVLS MGVFLGASTR IVDRTTGEVI YGRVPAYSVV VPGTMPGKPL PDGTPGPSLA CAVIVKRVDA QTRSKTAINE LLRA
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