Gene Acry_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1530 
Symbol 
ID5160777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp1691636 
End bp1693570 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content68% 
IMG OID640553445 
Product2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 
Protein accessionYP_001234657 
Protein GI148260530 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.320079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCA GATTTGGGAC ACTAGGAAAT TTCGGATTGC CAAATCCGCA CCACTGGCCG 
GCCTGTCGCC GCCGAAGTGA GCCGTGCCTG TTCAAGTCCG GCGCGGGCAT TGGCAAGCAC
GGTGGCTGGA TCGTCGCCCG AACGCGCCCA GCGCGACGCG ATGCCGATGG CCGCATGACG
GCCGGTGCCG GCCAGCATCG CATCAAGCCT TGCCACGATC CGGTCGCCAC GCTCGGCCGC
AATCAGGTGA TCGACGCCGT CACACCAGGC GGCAAGCCGG GTCGGCCCGA TCCGGCCGAT
CAGGTCGCTC GGCCGCAGCA TGTCACGCAG CGTTTCCGCC GATTCGCGAA TGACCGCCGA
AGACGCCTCG GAGCCCGTCG CGCCGCCCGA CTTTACCCAG CCAATGGCGA ACATGGTGCC
AACCCGCTCC TCGATATCGA GCCGGTCAAA CCGCCGATCG GCCTGCGCAA GAAAACTCGG
CAACGGCCAC AAGCCCGTTT CGGGGTCGAG CGCATTACGC TTGCCACCAC CGGCGACATC
GAGCAGGCGC ACGACGAGCG TGCGCAGATG CGGGCCGATC GCGGTCAGAA GTTCCGTTTC
CGCTGCGGTG AACCGCCTGT CTCCCGGGCT GCGCCATGCC AGGAGCGCGG CGCTGACCGA
TCGTCCGGCC GTCACGTTGC CGAGATCGAC CGGAATGGTG ATCGATTCGC CCCCCGGCAT
GTCGGCAAGG CCGATGCCGT AGGGGTAATC GGCCAGAACG GTCTCGGCTC CCGTCAGCGG
CGGGACCGGA CGAGCGACAA TACAGACGCC CGAATCGGCG AATTCCGCTG CCAGCAGGGC
GCAGGCGGCC GAGCCGGCGG TCGCCGCATC CGGCAATCCG GCCAGGCTTT CGATCATGCG
CACCAGGCGG TCGAAGCGCT CCGCATTTCC GCCGCCTGCC GAACCGGCAT TCGCATACGA
GTCCGTCGAA AAATCTGCCC GATTCGTCAT GGATGCGTTT TCGCAGGATC AGGTAAACAA
CGGATTACCA CCGGATTGAC AGGCGCGACC CTGCTCAGCA TGGTCGCGCC CACACAAGAT
ACGGAACGCC TGCCGATGGA CCACACGCAA CTCGCCGCCG CCGTCACCGC CGCCTGGGAA
CGCCGCGACC AGCTCAGTCC GGCCTATCAG GGATCCGACC GGGAGGCCGT CAGCGATGCG
CTCGCCCGTC TCGATCGGGG CGAACTGAGG GTTGCCGAGC CCGGCCCGGG CGGCTGGGTC
GTCCATCAAT GGCTCAAGCA GGCGATCCTC ATGTCCTTCC GCCTGCTGCC CAACCGCACC
ATGCCGGGCG CCGGCGGCGC GCCCGTGTTC GACAAGGTCC CGATGAAGTT CGGCGACTGG
GACGATGCGC GCTTCGCCGC CGCTGGCATC CGCGCGGTGC CCGGCGCCGT CGTCCGCCAT
TCGGCGCATG TCGGCCGCAA TACCGTGCTG ATGCCCTGTT TCATCAATGT CGGCGCCCGG
GTCGGCGAGG ACACGATGAT CGATACCTGG TCCACGGTGG GCTCCTGCGC GCAGGTTGGC
CGCAACTGCC ACATCAGCGG CGGCGTGGGA ATCGGCGGCG TGCTCGAGCC GCTGCAGGCC
AACCCCGTGA TCATCGAGGA CGACTGCTTC ATCGGCGCCC GCTCCGAAGT TGCCGAAGGC
GTGATCGTGG AGCGCGGCGC CGTGCTCTCC ATGGGCGTGT TCCTCGGCGC CTCCACCCGA
ATCGTCGACC GGACGACCGG CGAAGTGATC TATGGCCGCG TGCCGGCCTA TTCCGTCGTC
GTGCCGGGCA CCATGCCCGG CAAGCCGCTG CCGGACGGAA CTCCGGGCCC GTCCCTCGCC
TGCGCCGTGA TCGTCAAGCG GGTCGACGCC CAGACACGGT CGAAGACCGC GATCAACGAG
TTGCTGCGGG CGTGA
 
Protein sequence
MDFRFGTLGN FGLPNPHHWP ACRRRSEPCL FKSGAGIGKH GGWIVARTRP ARRDADGRMT 
AGAGQHRIKP CHDPVATLGR NQVIDAVTPG GKPGRPDPAD QVARPQHVTQ RFRRFANDRR
RRLGARRAAR LYPANGEHGA NPLLDIEPVK PPIGLRKKTR QRPQARFGVE RITLATTGDI
EQAHDERAQM RADRGQKFRF RCGEPPVSRA APCQERGADR SSGRHVAEID RNGDRFAPRH
VGKADAVGVI GQNGLGSRQR RDRTSDNTDA RIGEFRCQQG AGGRAGGRRI RQSGQAFDHA
HQAVEALRIS AACRTGIRIR VRRKICPIRH GCVFAGSGKQ RITTGLTGAT LLSMVAPTQD
TERLPMDHTQ LAAAVTAAWE RRDQLSPAYQ GSDREAVSDA LARLDRGELR VAEPGPGGWV
VHQWLKQAIL MSFRLLPNRT MPGAGGAPVF DKVPMKFGDW DDARFAAAGI RAVPGAVVRH
SAHVGRNTVL MPCFINVGAR VGEDTMIDTW STVGSCAQVG RNCHISGGVG IGGVLEPLQA
NPVIIEDDCF IGARSEVAEG VIVERGAVLS MGVFLGASTR IVDRTTGEVI YGRVPAYSVV
VPGTMPGKPL PDGTPGPSLA CAVIVKRVDA QTRSKTAINE LLRA