| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1514 |
|---|
| Symbol | |
|---|
| ID | 5160490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1674040 |
|---|
| End bp | 1676028 |
|---|
| Gene Length | 1989 bp |
|---|
| Protein Length | 662 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640553429 |
|---|
| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
|---|
| Protein accession | YP_001234641 |
|---|
| Protein GI | 148260514 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0937077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGAT CGGTCCTGAT CGCCAATCGC GGAGAGATCG CCTGCCGGGT GATCCGCACG
GCGCGGCGGA TGGGGCTGCG CAGCATCGCG GTGTTCTCGG ATGCCGATGC GGGGGCGGCG
CATGTCGCGA TGGCGGATGC GGCGGTGCGG ATCGGGCCGC CGGCGGCGGC GGAGAGCTAT
CTCGCGATCG ACCGGATCAT CGAGGCGGCG CGGCGCACCG GTGCCGAGGC GATCCATCCG
GGTTACGGGT TTCTCAGCGA GAACGCCGAT TTCGCGGAGG CCTGCGCCGC GGCGGGGCTC
GTGTTCGTCG GGCCGCCGGC GGAAGCGATC CGGGCGATGG GCTCGAAATC GGCGGCGAAG
GCGCTGATGG AACAGGCCGG CGTGCCGCTG GTGCCCGGCT ATCACGGCGC GGACCAGGAC
CCGGCGGCGC TGGCGCGGGC GGCGGCGGAG ATCGGCTATC CGGTGCTGAT CAAGGCGTCC
GCCGGTGGCG GCGGCAAGGG CATGCGCGTG GTGCGCGCGG CGGCCGATTT CGCGGCCGAG
CTCGACCGGG CGAAGGGCGA GGCGCGCGCC GCCTTCGGCG ATGACCGCGT GCTGGTCGAG
AAATACCTGA CGAAGCCGCG GCATATCGAG ATCCAGGTCT TCGCCGACAC CCACGGCAAC
GTGGTTTCGC TGCACGAGCG CGACTGCTCG ATCCAGCGGC GGCACCAGAA GATCGTCGAG
GAGGCGCCGG CGCCGCTGAT CGACGAGGCG ATGCGCGCGG CAATGGGCAA GACGGCCTGC
GACGCCGCGC GGGCGATCGG CTATGTCGGC GCCGGAACGG TCGAGTTCAT CGCCGAGGAT
GGCGCGTTCC ACTTCATGGA AATGAACACG CGGCTGCAGG TCGAGCATCC GGTGACCGAG
ATGATCACCG GGATCGACCT CGTCGAATGG CAGTTCCGCG TGGCCGCGGG CGAGGCGCTG
CCCCTGAAGC AGGAGGGGAT CGGCCGGCGG GGCCACGCGG TGGAGGTGCG GCTCTATGCC
GAGGACCCGG CCCGGGATTT CGCGCCCTCG ACCGGCGCGC TGGCGCGGCT GCGCCTGCCG
GCGGAGAGCC GCCATTTGCG GATCGAATCC GGCGTGCGCG CCGGCGACGA GGTGTCGGTG
CATTACGATC CGATGATCGC CAAGCTCGTC ACCTGGGACG AGGACCGGGA CGGCGCGCTG
CGGCACATGG CGCAAGCGCT GGCGGCCTGC GAGATCGACG GGGTGCAGAC CAATCTCGAC
CTGCTGCGGC GGATCGTGAC GCACCCGGAT TTTTGCGCGG CCGCGCTCGA TACCGGGTTC
ATCGCCCGGC ACGAGGCGGC GCTGCTGCCG GCGCGGGGCG CGCCGCCGGT CGCGGTGCTG
GCGGCGGCGG CGCATCGCTG GCTGGCCACG CTGCCGCAAA GCGGCGATCC TTCCGATCCG
TGGTCGCCCT GGGCGACGCG CGCGGCCTGG CGGCTGAATG GCGAGCGTTT CCAGGATGTC
GTGATCGAGG ATGGCGAGGC CACGCACCAT CTGCGCCTGC ATCCGCGCGA CGAGCGGCAT
TTCCGCCTCG ACCACGCGGG GCGGGAGGTC TTCGTTTGCG TCGATGCGGC CGGCGAGGAT
GAAGTGTCGG TCGAGATCGA CGGTATCGTC GCGCGGCTGG GCACGAGCGG CCAGGGGGGA
CGGATCGTCG TTTTTGCCGA TGGCGCGCGC CACGTGCTGG CCGTCGCCGA TCCGCACCGC
GCGGCGGGCG AGGCGGACGG CGCGGCGGCG CGGGTCACCA GCGTGATGCC GGGCAAGGTC
GTGGAACTCG CCGTCGCCGC GGGCAGCGCG GTGCGCGAGG GCGATCTGCT CGCGGTGATC
GAGGCGATGA AGGTGCAGTT CCGCATCACC GCCCCGCGGG ACGGGGTGAT CGCCGCCCTC
CATTGCGCGG TGGGCGACCT GATCGAGGAC GGCGCCGAAC TCATGGCGTT CGCCACGGAT
ACGGACTGA
|
|---|
| Protein sequence | MFGSVLIANR GEIACRVIRT ARRMGLRSIA VFSDADAGAA HVAMADAAVR IGPPAAAESY
LAIDRIIEAA RRTGAEAIHP GYGFLSENAD FAEACAAAGL VFVGPPAEAI RAMGSKSAAK
ALMEQAGVPL VPGYHGADQD PAALARAAAE IGYPVLIKAS AGGGGKGMRV VRAAADFAAE
LDRAKGEARA AFGDDRVLVE KYLTKPRHIE IQVFADTHGN VVSLHERDCS IQRRHQKIVE
EAPAPLIDEA MRAAMGKTAC DAARAIGYVG AGTVEFIAED GAFHFMEMNT RLQVEHPVTE
MITGIDLVEW QFRVAAGEAL PLKQEGIGRR GHAVEVRLYA EDPARDFAPS TGALARLRLP
AESRHLRIES GVRAGDEVSV HYDPMIAKLV TWDEDRDGAL RHMAQALAAC EIDGVQTNLD
LLRRIVTHPD FCAAALDTGF IARHEAALLP ARGAPPVAVL AAAAHRWLAT LPQSGDPSDP
WSPWATRAAW RLNGERFQDV VIEDGEATHH LRLHPRDERH FRLDHAGREV FVCVDAAGED
EVSVEIDGIV ARLGTSGQGG RIVVFADGAR HVLAVADPHR AAGEADGAAA RVTSVMPGKV
VELAVAAGSA VREGDLLAVI EAMKVQFRIT APRDGVIAAL HCAVGDLIED GAELMAFATD
TD
|
|---|
| |