| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1444 |
|---|
| Symbol | |
|---|
| ID | 5161831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1605082 |
|---|
| End bp | 1606323 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640553358 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001234572 |
|---|
| Protein GI | 148260445 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTT CCACGTCCCG CAGGCGCGGG GCCGCTTTCG GCTTCATCAT GGCCACGATC
CTGCTGGACA TGCTGGCCAT GGCGATCGTG CTGCCGGTCC TGCCCGCGCT CATCACCGGG
CTGGTCGGCG GGGGCGCCGG GCTGAGCGCG CATGTGTTCG GCGCCTTCGG TGCCGCCTGG
GCGGCGATGC AGTTCATTGC CTCGCCGATG CTTGGCGCGC TGTCCGACCG GTTCGGCCGG
CGGCCGGTGA TCCTGCTCTC CTGCCTCGGC CAGGCGGTGG ATTTCACCGT GATGGCGCTG
GCTCCATCGG TCGGCTGGCT GCTCGCCGGG CGGATTCTCT CCGGCGCTTC CTCGGCCAAC
ATCGCCGCCG CGAATGCATA TATTTCCGAT GTCACGCCGC CCGAGCGGCG GGCGGCGGCG
TTCGGCGTCT CGGGCGTTGC CGCGGCGATC GGCTTTGTGC TCGGACCGGC GTTGGGCGGT
CTGCTCGGCG CGGTTTCGCT GCGCCTGCCG TTCTGGTTCG CCGCAGGTCT TTCCCTCGCC
AACTTCCTCT ACGGTCTGGT GGCGCTGCCG GAATCGCTCG CGCCGCGCCG CCGCCGGCGG
ATCGGCTGGC GGGGCCTCAA CCCGCTGGAT GCGCTGCGCT TCTATCGCCG GCCGGGCGTG
GCCGCGCCCG CGACGATCTA TGCGCTCGGC ACGCTCGCGC TGCAGGCGGT GCCTTCGGTC
ATGGTGCTTT ACGTGCAGGA GCGGTTCGGC TGGCGCCCAC AGCTGATCGG CGCCACCCTC
GCCGCCGCCG GGGTCGGGTT TGCCGTGGTC GGCGGCGTTG TGGTCGGGCC GATGGTGCGC
CGGCTTGGCG AGCCGAGAAC GCTTATCCTT GGCCTGATCG GCGGCGCCGC GGGGTTTGTG
CTGTTCGGTC TCGCGCCCGA TTCGCGGATT TTCTGGATCG GCGTACCGGT TCTCTCGGCC
TGGGGGCTGG CGATGCCTGC GGTGCAGGGG ATCATGGCGC ACCGGATTGG CGGGCGCGAG
CAGGGGCGGC TGCAGGGGTT GCTCGCCAGC CTGAACGGGC TGACCGCGCT GGTCGGCCCG
TTGCTGTTCA CCACGATCTA CGCGGCGACG CTGGGGCCTG ACGGCACGGC GGACGTGCCG
CGCTCGGGCA CCGCCCTCGT CGTCGCCGGC CTGCTGCTGC TCGCCTCGCT GATTCCGCTG
CGCTGGGCGG TGCGGTATCA GGCCGGCAGG CCGAACCCGT AG
|
|---|
| Protein sequence | MSGSTSRRRG AAFGFIMATI LLDMLAMAIV LPVLPALITG LVGGGAGLSA HVFGAFGAAW
AAMQFIASPM LGALSDRFGR RPVILLSCLG QAVDFTVMAL APSVGWLLAG RILSGASSAN
IAAANAYISD VTPPERRAAA FGVSGVAAAI GFVLGPALGG LLGAVSLRLP FWFAAGLSLA
NFLYGLVALP ESLAPRRRRR IGWRGLNPLD ALRFYRRPGV AAPATIYALG TLALQAVPSV
MVLYVQERFG WRPQLIGATL AAAGVGFAVV GGVVVGPMVR RLGEPRTLIL GLIGGAAGFV
LFGLAPDSRI FWIGVPVLSA WGLAMPAVQG IMAHRIGGRE QGRLQGLLAS LNGLTALVGP
LLFTTIYAAT LGPDGTADVP RSGTALVVAG LLLLASLIPL RWAVRYQAGR PNP
|
|---|
| |