Gene Acry_1396 details

Gene Information

• Locus tag: Acry_1396
• ID: 5160665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1550708
• End bp: 1552723
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640553311
• Product: hydrogenase 4 subunit B
• Protein accession: YP_001234525
• Protein GI: 148260398
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGCGG CACTGCTGCT CTGCGCCCTG GCCTGGCTCG CGCTCGGCGC GGCCGGCGCA 
GCACTTTCCC GCCGCGATGC CGGGCGCATC GTGGTCTATG GCGGGTCGCT CGCCGTGTCC 
CTGATCGCGC TTGGCGTGGC CTTCGCATCG CTTGGCGGCG GGGCGCCGGG CATCACCCTG 
CCGCTCGGCC TGCCGGGAAT CGGCATGCGG TTCGCCGTCG ATCCGCTGTC GGCCGCGTTC 
CTCGTGCTGG TCGATCTCGG CGGTGCGGCC GCCAGCCTGT ATGCGCTCGG CTACGGGCGA 
CACGAGGCGG AGCCCTGGCG GGTGCTGCCC TTCTACCCGG TGTTCCTCGC GGCGATGAAC 
CTCGTGGTGA TCGCCGCCGA CGCCTACGGG TTCCTGCTGT TCTGGGAGCT GATGTCGCTC 
GCCTCCTGGG CGCTGGTGAT GGCGGACCAT ACGCGGGCGG AGACGAGGCT GGCGGGGTTC 
GTCTATCTGT TGATGGCGAG CGCGGGCACG CTGATGCTGC TGCTCGCCTT CGGCCTGCTC 
GCGGGACCGC ACGGGGCATA CGGATTCGCC TCCATCGCGG CGGCGCACCG GGCGCAATGG 
ACAGGGGCGG TCGCGATGCT GCTGGCGCTG CTCGGCGCCG GCTCCAAGGC GGGGCTGATG 
CCGCTGCATG TCTGGCTGCC GCGCGCGCAT CCCGCCGCAC CGAGCCATGT CTCGGCGCTG 
ATGAGCGGGG TGATGACGAA GGTGGCGGTC TACGCCTTCA TCCGCATCGC CTTCGATCTC 
GCCGGCCCGG CCGCCTGGTG GTGGGGGCTC GTGGTGCTGG CGGCAGGCGC CGTTTCCGCC 
GTGCTCGGCG TGCTGCAGGC GCTGCTGGAA GACGATGTGA AGACCGTGCT CGCCTACAGC 
ACGATCGAGA ATATCGGACT GATCTTCGCC GGGCTCGGCC TCGCCCTCGC CTTCCGGGCC 
GACGGCCTGG CGCTGGCCGC GAGCCTCGCG CTCACCGCCG CGCTGTTCCA CGCCTTCAAC 
CACATGCTGT TCAAGAGCAC GCTGTTCTTC GGCGCCGGCG CGATCCAGCA CGGCGCCGGC 
ACCCGGCGGC TTTCGGAACT TGGCGGGCTG ATCCACCGGA TGCAGATCAG CGCGGTGCCG 
ATGCTGGTCG CGGCGATGGC GATCGCGGCG CTACCGCCGC TGAACGGGTT CGCCTCGGAA 
TGGCTGCTGT TGCAGGCGGT GCTGCTCAGC CCGTCGCTGC CGCAATTCGG GCTCAAGCTC 
GCGGTGCCGG CGGCGGGCGC GCTGCTGGCG CTGGCCGCGG CCTTTGCCAG CGCCTGCCTC 
GTCCGGCTCT ACGGCATGGC CTATCTCGGC CGGCCGCGCA GCGCGGCCGC TGCAAGCGCG 
CATGAGGCCG ACGGTATCTC GCGCGCCGCG ATGATCGGGC TCGCTTCACT CTGCCTCGTG 
TTCGGGCTGA TGCCGGCGCT GGTGCTCGGC CATCTTGCGC CGGTGGCAAG GGAACTGGTC 
GGGATATCGC TGCCGGGACG GCCGGGCTGG AGCGCGCTCA CCCTGCTGCC GGTGCCGGCG 
CGGCAGAGCT CCTACGATCC GCTGCTGATC GCGCTGTTCA TCGCGCTGAC CGGCAGCCTC 
GCGGCGCTGG GGCTGCACCG CTTCGGCTCG CGCGCTCTGC GCCGGGCGGT GCCCTGGGGA 
TGCGGCTTTC TCACCGAGGG CAGGGCGGCG CTGCCGGCGG GGACGCAATA TTCGCCCGCG 
GGATTCAGCC AGCCGATCCG CCGCGTGTTC GCCACATCGC TGTTCCGCGC CCGCGACGAG 
GTGGCGATGC CACCGCCGGG GATGGCCGCG CCGGCGCGCT TCGCCAGCCG TATCACCGAT 
CCGGCATGGG ATGGCGGCGC GCTGGCGCTC GCCGCACTGG TCAACCGCGC CGCCGACCGC 
GCCAACCGGC TGCAGTTCCT GACCATACGG CGCTATCTCG CGATGGTGTT CGTGACGCTG 
CTGATCCTGC TCGCGACGGT GGCGTTATGG GCCTGA 

 

Protein sequence

MTAALLLCAL AWLALGAAGA ALSRRDAGRI VVYGGSLAVS LIALGVAFAS LGGGAPGITL 
PLGLPGIGMR FAVDPLSAAF LVLVDLGGAA ASLYALGYGR HEAEPWRVLP FYPVFLAAMN 
LVVIAADAYG FLLFWELMSL ASWALVMADH TRAETRLAGF VYLLMASAGT LMLLLAFGLL 
AGPHGAYGFA SIAAAHRAQW TGAVAMLLAL LGAGSKAGLM PLHVWLPRAH PAAPSHVSAL 
MSGVMTKVAV YAFIRIAFDL AGPAAWWWGL VVLAAGAVSA VLGVLQALLE DDVKTVLAYS 
TIENIGLIFA GLGLALAFRA DGLALAASLA LTAALFHAFN HMLFKSTLFF GAGAIQHGAG 
TRRLSELGGL IHRMQISAVP MLVAAMAIAA LPPLNGFASE WLLLQAVLLS PSLPQFGLKL 
AVPAAGALLA LAAAFASACL VRLYGMAYLG RPRSAAAASA HEADGISRAA MIGLASLCLV 
FGLMPALVLG HLAPVARELV GISLPGRPGW SALTLLPVPA RQSSYDPLLI ALFIALTGSL 
AALGLHRFGS RALRRAVPWG CGFLTEGRAA LPAGTQYSPA GFSQPIRRVF ATSLFRARDE 
VAMPPPGMAA PARFASRITD PAWDGGALAL AALVNRAADR ANRLQFLTIR RYLAMVFVTL 
LILLATVALW A