Gene Acry_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1288 
Symbol 
ID5161227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp1437294 
End bp1439069 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content68% 
IMG OID640553203 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001234418 
Protein GI148260291 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTATTG GGAAGCTACG TCAAATCTCT GACAAAAGCA GGATGTTTGA TGCCATTGGA 
AACTCCTTCG GCATCATCGG TTTCAAACCC GACGGCACGA TCATCGACGC CAACGACAGT
TTTCTCCGTT TGATGGGCTA CGGCGCCGCC GACATCATCG GGCGCCATCA TCGTATTTTT
GTAACCGTAA CCGAGCGCGA CAGCGCCGCC TACGGCGAGT TCTGGCAGCG CCTGCGCGGC
GGCGCCTTCT GCTCCGGCGA GTTCCGCCGC ATCGCCAAGT CCGGCCACGA TGTCTGGCTC
CGCGCCTCCT ACGTCCCCGT CCGCAACCGC GCCGGCAAGG TCGCGAAGGT GGTCAAGGTC
GCCCTCGACA TCACCGCCGA GAAACGGGCC GCCGCCGAAA ACGAAAGCAT CCTCAACGCC
ATCGAGCGCT CCCAGGCCGT CATCAAGTTC GCGCTCGACG GCACCATCCT CGAAGCCAAC
GACAACTTCC TTCGCGTGAT GGGTTACGCG CGCGACGAGA TCGTGGGCCG CAAGCACAGC
ATGTTCGCTA CACCAGCATA CGCCGCCAGC CGCGAATACC AGGCCTTCTG GGAGCGCCTG
CGCCAGGGCG AATTCATCGC TGGTGATTTC GAGCGCGTGG GCAAGGGCGG CCGCCACGTC
TGGCTCCAGG CCACCTACAA CCCGGTCTAC GACGCCGAGG GCAAGGTGAC GAAGGTCGTC
AAGTTCGCGG TCGACCTCAC CGAACGCATG GCCGAGGTCG GCCTCGTCGG CGACGCCCTC
GAACGCGTCT CCGAAGGTGA TCTCACCGCC TCCGTCGACC GCCAGCTGAT CCCCTCGCTC
GACAAGCTCC GCATCGACTT CAACACCGCC GCCAGCCGCC TCGCCGAAAG CGTCAACGGC
GTCCGCCAGA GCACCGACGA AATCAATCTC GGCGTCGCCG AAATCGCCGA AGCCGCCGAG
GATCTCGCCC GCCGCACCGA ACAGCAGGCC TCCACCCTGG AGGAAACCTC ATCCGTGCTC
GACAGCGTCA CCACCGGCAT CCGCCGCACC GCCGACAACG CCTCCAAGGC CGCCAGCGCC
GTCGACGCCA CCAACAACGC CGCCCGCAAG TCCCACGCCA TCGTCGGCGA GGCCGTGGTC
GCCATGAACC GCATCGAAAC ATCCGCCCGC GAAATCGACC AGATCATCGG CCTGATCGAT
GAAATGGCCT TCCAGACCAA CCTCCTCGCC CTCAACGCCG GGGTCGAGGC CGCCCGCGCC
GGCGATGCCG GGCGCGGCTT CGCCGTCGTC GCCTCCGAGG TCCGCGCCCT CGCGCACCGC
TCCGCCGATG CCGCCAAATC CATCAAGCTG CTCATCGCCC GCTCCTCCGA ACAGGTCGGC
AACGGCGTCC GCCTCGTCGG CGAAACCGGC ACCGCGCTCG ATACCATCCT CGGCCACGTC
ACCGACCTGC ACGGCCTCGT CGGCGAAATC GCCACCGCCG CCGCCGAACA GGCCGGCAGC
CTCGCCGAAA TCAACGCCGC CACCGGCCAG ATGAACCAGG CCGTCCAGCA GAACGCCGCC
ATGGTCGAGC AGACCTCCGC CGCCACCCAC TCCCTGCGCG AGGAAATCAG CCGCCTCGCC
GGCCGCGTCT CCGGCTTCCG CACCGCCCAC GCCGCACCCG CCTACGCGGC ACCCGCCCAC
GCGGCACCTG CCCACGCGGC ACCGACAGCA TCCGCCCCCA TCGCCCCGGC CCGCACCCCG
CCGCGCCGCG CGCGCCGCGT CGCCGAACCC GCCTGA
 
Protein sequence
MVIGKLRQIS DKSRMFDAIG NSFGIIGFKP DGTIIDANDS FLRLMGYGAA DIIGRHHRIF 
VTVTERDSAA YGEFWQRLRG GAFCSGEFRR IAKSGHDVWL RASYVPVRNR AGKVAKVVKV
ALDITAEKRA AAENESILNA IERSQAVIKF ALDGTILEAN DNFLRVMGYA RDEIVGRKHS
MFATPAYAAS REYQAFWERL RQGEFIAGDF ERVGKGGRHV WLQATYNPVY DAEGKVTKVV
KFAVDLTERM AEVGLVGDAL ERVSEGDLTA SVDRQLIPSL DKLRIDFNTA ASRLAESVNG
VRQSTDEINL GVAEIAEAAE DLARRTEQQA STLEETSSVL DSVTTGIRRT ADNASKAASA
VDATNNAARK SHAIVGEAVV AMNRIETSAR EIDQIIGLID EMAFQTNLLA LNAGVEAARA
GDAGRGFAVV ASEVRALAHR SADAAKSIKL LIARSSEQVG NGVRLVGETG TALDTILGHV
TDLHGLVGEI ATAAAEQAGS LAEINAATGQ MNQAVQQNAA MVEQTSAATH SLREEISRLA
GRVSGFRTAH AAPAYAAPAH AAPAHAAPTA SAPIAPARTP PRRARRVAEP A