Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1260 |
Symbol | fadE |
ID | 5162472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 1403930 |
End bp | 1406506 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640553174 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001234390 |
Protein GI | 148260263 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.276244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTGA TCACTGCCCT CTGGTGGCTC GCCGGCATCG CCGGCGCCGG CGCCCTCATT GCCGCGCGCC GCCCCGCGCG GCTGTTTCTT GCCGGCCTCC TGGCCTGGCT GGTCATCGCC TGGCTGACCG GCGCCGCCGG CTGGATCGCG AGCGTCATCC TGCTGGTCGT CATCGGCGCG CCGGCGGCCC TGCTGTCGGC GACCGGCACC CGCGAGCGCC TGCTCAGCCG CCGCCTGCTG CCCGTCTTCC GCCGCATCAT GCCGAAGATG AGCGAGACCG AGCGCAGCGC CATCGAGGCC GGCTCCGTCT GGTGGGACGC CGAACTCTTC GCCGGCCGCC CCGACTGGTC GAAGCTGCTC GCCACCCCGA AGCCGGTGCT CAGCCCCGAG GAGCAATCCT TCCTCGATAA CGAGACCGAG CGCCTCTGCG ACCTCGCCAA TGACTGGGAC AGCACCCAGA TCTGGCAGGA CATGCCGCCC GCCGCCTGGG ACTATGCCAA GGAAGCCGGC TTCCTCGGCA TGATCATCCC CCGATCGTAT GGCGGCAAGG GCTTCTCGGC ACTCGCGCAT TCCGCGGTGG TCACCAAGCT CGCCACCCGC TGCTCGGCCG CGGCGGTCTC GGTCATGGTG CCGAACTCCC TCGGCCCGGC CGAACTCCTG CTCCATTACG GCACCGAGGA GCAGAAGAAC CACTATCTCC CGCGCCTCGC CCGCGGCGAG GACGTGCCCT GCTTCGCCCT CACCAACCCC TATGCCGGCT CCGACGCCGC CTCGATCACC GACACGGGCA TCGTCGTCCG CCGCATGTGG GAAGGCCGCG AGACCCTCGG CTTCCTGGTC TCCTGCGACA AGCGCTACAT CACCCTCGCC CCGGTCGCGA CCGTGGTCGG CCTCGCCTTC CGCGTCCGCG ATCCCGAAGG CCTGCTCGGC GACAATCCCG AGCCCGGCAT CACCTGCGCG CTGATCCCGC GCGAGCATCC CGGCCTCGAG ATCGGCCGTC GCCACTGGCC GCTCAACGCC GTCTTCCAGA ACGGCCCGAT CCGCGCGCAG GACATGTTCG TCCCGGTCGA CATGGTCATC GGCGGCCAGG CCCAGGTCGG CAGGGGCTGG CGCATGCTGA TGGAATGCCT CGCCGCCGGC CGCGCCATCT CGCTGCCCTC CTCGGCCACC GGCGCGGCCA AGATCGCCAC CAACGGCACC AGCGCCTATG CCGCCATCCG CCGCCAGTTC AACATGCCGG TCGGCCGGTT CGAGGCGATC GAGGAGCCGA TGGGCCGCAT GGGCGGCCAC CTCTACGCCA TGGACGCCAC CCGCAAGCTC TCCGCCGTCG CCATCGATAT CGGCGAGAAG CCCTCGGTCA TCTCCGCCAT CGCCAAATAC CACATGACCG AACGCGGCCG CATGGTGGTG GCCGATGCGA TGGACATCGC CGGCGGCAAG GCCATCTGCA TGGGCCCCGG CAACTTCCTC GCCCGCGCCT GGCAGCAGAT CCCGATCGCG ATCACGGTCG AGGGCGCGAA CATCATGACC CGCAGCCTGA TCATCTTCGG CCAGGGCGCG ATCCGCTGCC ATCCCTACAT CCTCAGGCTG ATGCACGCCG GCGCCGAGAG CGACGGCCGC AAGGCGCTGC GCGACTTCGA CCGCGCCTTC TTCGGCTACA TGGGCTTCGT CGCCAGCAAC GCGCTGCGCG CCGGCCTCGC CGGTCTTGGC GTCCGCCGCC GCGCGCCGAA AGGTGCGGCG CCCGAACTCG CCCGCTACTA CCGCGCGGCC GACCGTCTCT CCGTCGTCCT CGCCCTGTCG TCGGACATCG CGATGGCGAC CCTCGGCGGC GCGCTCAAGC GCAAGGAAAG CGTCACCGCC CGCCTCGGCG ACGTGCTGAG CCAGCTCTAC ATCCTCTCCG CCGTGCTCAA GCGCTACCAG GATGACGGCC GCCCCGGCGC CGACCTGCCG CTGGTCCACT GGGCCGCGCA GGACGCCCTG CACCGCGCCC ACACCGCCCT GCGCGAGCTC TACGCGAACT ACCCGATCCG CCCTGTCGGA ATTGCGCTCC GCCTGCTGTG CTTCCCCTTC GGCGTGCCGG CCGCGGCACC CTCCGACCGC CTGCATGCCG AGATCTCCGC GCTCCTGCGC GAGATGGGGC CGACCCGCGC GCGTCTTTTC GAAGGTGCGT GGCAGCCGCG CCCGGACATC GAGCCGCTGC TCGGCGCCCT CGAACCCGCC GCGATGGCCT ATCCGCGCAT CGAGGCGATC GAGCGCCGCC TGAAGGACTC GATCCGCGCC GGCACCATCG GCCGCCTGCC GCAGGCCCTG CCGCTGCTCG TCGACTGGGC CGGCGAGGCG CGGCAGAAGG GCCTGATCGA CGCGGAGGAG GCCGCGCTGA TCCGCACCTT CGCCGACAAT GCGGCGAAGG TCATCGCGGT CGATGATTTC CCGCAGGATT TCGGCATGGC GGAAGCCCTG CAGACCCGCG CCGCCTACTG GGCCGAGCGC GATGGCGGCG AGGCGCCCGG CATCGCCCGG ATCGGGAGGG GCGGCGCGAA GGTGCGGTCG TCGCGCGCAC CGACGGCGGC CGAATGA
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Protein sequence | MDLITALWWL AGIAGAGALI AARRPARLFL AGLLAWLVIA WLTGAAGWIA SVILLVVIGA PAALLSATGT RERLLSRRLL PVFRRIMPKM SETERSAIEA GSVWWDAELF AGRPDWSKLL ATPKPVLSPE EQSFLDNETE RLCDLANDWD STQIWQDMPP AAWDYAKEAG FLGMIIPRSY GGKGFSALAH SAVVTKLATR CSAAAVSVMV PNSLGPAELL LHYGTEEQKN HYLPRLARGE DVPCFALTNP YAGSDAASIT DTGIVVRRMW EGRETLGFLV SCDKRYITLA PVATVVGLAF RVRDPEGLLG DNPEPGITCA LIPREHPGLE IGRRHWPLNA VFQNGPIRAQ DMFVPVDMVI GGQAQVGRGW RMLMECLAAG RAISLPSSAT GAAKIATNGT SAYAAIRRQF NMPVGRFEAI EEPMGRMGGH LYAMDATRKL SAVAIDIGEK PSVISAIAKY HMTERGRMVV ADAMDIAGGK AICMGPGNFL ARAWQQIPIA ITVEGANIMT RSLIIFGQGA IRCHPYILRL MHAGAESDGR KALRDFDRAF FGYMGFVASN ALRAGLAGLG VRRRAPKGAA PELARYYRAA DRLSVVLALS SDIAMATLGG ALKRKESVTA RLGDVLSQLY ILSAVLKRYQ DDGRPGADLP LVHWAAQDAL HRAHTALREL YANYPIRPVG IALRLLCFPF GVPAAAPSDR LHAEISALLR EMGPTRARLF EGAWQPRPDI EPLLGALEPA AMAYPRIEAI ERRLKDSIRA GTIGRLPQAL PLLVDWAGEA RQKGLIDAEE AALIRTFADN AAKVIAVDDF PQDFGMAEAL QTRAAYWAER DGGEAPGIAR IGRGGAKVRS SRAPTAAE
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