| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0623 |
|---|
| Symbol | |
|---|
| ID | 5160042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 702542 |
|---|
| End bp | 703717 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640552537 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001233764 |
|---|
| Protein GI | 148259637 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA CGACGCCATC CGACGCAACG CCGCAATTCG CGCTCGACGA GGCGCAGCGC
GCGATTGCCG AGATGGCGCG CGGCTTCGCC GACGAGCGGC TGGCGCCGCA CGCGCTGGAG
TGGGACGCGG CGCGGCACTT TCCTCTCGAC GTGATCCGCG AGGGCGCAGC CCTCGGCATG
GGCGGGATCT ATGTGCGCGA GGAGAGCGGC GGGTCGGGGC TGACGCGGCT CGACGCGGCG
CTGATCTTCG AGGCGCTGGC GACCGGCTGC CCGGCGGTTT CGGCCTACAT GTCGATCCAC
AACATGGTGG CCTGGATGGT CGACCGGTTC GGTGACGACG CGCAGCGCCG GGACGTGTTG
CCGGCGCTGG TGAGCATGGA GCATCTCGCC AGCTATTGCC TGACCGAGCC GGGGGCGGGA
TCGGACGCGG CGGCGCTGAA GACGAAGGCC GTGCGCGATG GCGACGATTA CGTGCTCGAC
GGCGTCAAGC AGTTCATCTC GGGCGCGGGG GCGACCGACC TTTATCTGGT GATGGCGCGC
AGCGGCGGCG CCGGGCCGCG CGGGATTTCC TCGTTCCTGG TGCCGAAGGA TGCGAAGGGC
CTGGGCTTTG GCGCCAACGA GCGGAAGATG GGCTGGAACG CGCAGCCGAC GCGCCAGGTG
GTGTTCGAAT CCTGCCGCAT TCCCGCACGG TTCCGGCTCG GCGCGGAAGG CGAGGGGTTC
CGCATCGCGA TGAGCGGGCT CGATGGCGGG CGGGTGAATA TCGGCGCCTG TTCGCTCGGC
GGCGCGCAGG CGGCGCTGGA GAAGGCGCAG CGCTACATGG GCGAGCGCGA GGCGTTCGGC
CGGCGGCTGG AGGATTTCCA GGCGTTGCAG TTCCGGCTTG CCGACATGGC GACCGAGCTG
GAGGCGGCGC GGCTCTTCCT GTGGTCCGCG GCGGCAGCGC TCGACCGCGG CGAGGCGGAC
GCGACGCGGC GCTGCGCGAT GGCGAAGCGG ATCGCCACCG ATACCGGTTT CAACGTTGCC
AACAATGCGC TGCAACTGTT CGGCGGCTAT GGCTATCTCG CCGAATACGG CATCGAGAAG
ATCGTGCGCG ATCTGCGGGT GCATCAGATT CTGGAAGGGA CGAACGAAAT CATGAGACTG
ATCGTCGCGC GCGGCCTCAT CGGGCGGAAC GCATGA
|
|---|
| Protein sequence | MNATTPSDAT PQFALDEAQR AIAEMARGFA DERLAPHALE WDAARHFPLD VIREGAALGM
GGIYVREESG GSGLTRLDAA LIFEALATGC PAVSAYMSIH NMVAWMVDRF GDDAQRRDVL
PALVSMEHLA SYCLTEPGAG SDAAALKTKA VRDGDDYVLD GVKQFISGAG ATDLYLVMAR
SGGAGPRGIS SFLVPKDAKG LGFGANERKM GWNAQPTRQV VFESCRIPAR FRLGAEGEGF
RIAMSGLDGG RVNIGACSLG GAQAALEKAQ RYMGEREAFG RRLEDFQALQ FRLADMATEL
EAARLFLWSA AAALDRGEAD ATRRCAMAKR IATDTGFNVA NNALQLFGGY GYLAEYGIEK
IVRDLRVHQI LEGTNEIMRL IVARGLIGRN A
|
|---|
| |