| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0476 |
|---|
| Symbol | |
|---|
| ID | 5160553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 529383 |
|---|
| End bp | 530342 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640552392 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001233619 |
|---|
| Protein GI | 148259492 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.292673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAG GACTGACCAT CTCCCGCGTG CTGCCCGCAC CGGTCGAGGC TCGCGCCGCC
GAGGGCTTCG CCGCCCGCTT CCTCGCGCAG GACGGCGCTT TCGACGCCGC CGCCTTCCTC
GCCGCACTCG ATGGCGCCGC CGCCGCCCTG ATCACCCCGG CCGACCGGCT CGACGCAGCG
GCCATCGCCC GCATCCCCGC CACCCTGCGC GTCCTCGCCA CCTTCTCCGT CGGCACCGAC
CATATCGATC TCGACGCCGC GAAATCGCGC GGCCTCGCCG TGGTCAACAC GCCGGACGTG
CTCTCCTTCG CCACCGCCGA GCTTGCCCTT ACGCTGATGC TCGCCGCCGC CCGCCGCGCC
GGCGAGGGCG AGCGCATCGT CCGCGCCCGC GCCTGGCCGG GCTGGACACC CACCTACCTC
CTCGGCACCA GCCTCCAGGG CAAGACGCTC GGCATCCTCG GCATGGGCCG CATCGGCCAG
GCGCTGGCGC GGATGGCGCA GGGCCTGTCG ATGCGCGTCG TCTATCACAA CCGCCGCCGC
CTGCCGCCGG AGCAGGAGGG CGGCGCCGCC TTCATCGCCG ACGAGGCCGA CTTCCTCTCC
GCGGCGGACG TGCTGTCGAT CCACCTGCCC GGCGGCGCCG CGACGCTGCA CTGGCTGAAC
GCCGCGCGCA TCGCCCGCCT CAAGCCGGGC GCCATCGTCG TCAATACCGG CCGCGGCACC
ACGATCGACG ATGAAGCCCT CGCCGCTGCA CTCGCCAGCG GCCATCTTGG CGCCGCCGGG
CTCGACGTCT TTCCCGCCGA ACCCGCCGTG CCCGAGGTCT ATCTCGGTCT CGAGAATGTC
GTCCTGCTGC CCCATCTCGG CAGCGCCACG CGCGAGACCC GCACTGCGAT GGGCATGCTG
GCGCTCGACG GGATCGAGGA GGTACTGGCA GGGCGGAGCC CCGCCAACCT CGTCGCCTGA
|
|---|
| Protein sequence | MKPGLTISRV LPAPVEARAA EGFAARFLAQ DGAFDAAAFL AALDGAAAAL ITPADRLDAA
AIARIPATLR VLATFSVGTD HIDLDAAKSR GLAVVNTPDV LSFATAELAL TLMLAAARRA
GEGERIVRAR AWPGWTPTYL LGTSLQGKTL GILGMGRIGQ ALARMAQGLS MRVVYHNRRR
LPPEQEGGAA FIADEADFLS AADVLSIHLP GGAATLHWLN AARIARLKPG AIVVNTGRGT
TIDDEALAAA LASGHLGAAG LDVFPAEPAV PEVYLGLENV VLLPHLGSAT RETRTAMGML
ALDGIEEVLA GRSPANLVA
|
|---|
| |