Gene Acry_0420 details

Gene Information

• Locus tag: Acry_0420
• Symbol: uvrC
• ID: 5162499
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 473917
• End bp: 475779
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640552337
• Product: excinuclease ABC subunit C
• Protein accession: YP_001233564
• Protein GI: 148259437
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000882939
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCTCAG GCGCGCTCGT CTCCATGCCG GCGGCGCCTG GCGTATACCG GATGCTCGAT 
CTCTCCGGAA ACGCGCTTTA TGTCGGCAAG GCGCGTAGCC TGAAGAAAAG AGTCACGACC 
TATACGCAGA TCGCACGTTT GCCCGAACGG TTGCGGCGCA TGGTGTCGGA AACCTCCACC 
GTCGAGATCA TCACCACCCA TACGGAAGCC GAGGCGCTGC TTCTTGAAGC CAATCTGATC 
AAGAGGTTGA AGCCTAAATA CAATATCCTG CTGAGGGATG ACAAATCCTA TCCCTGGTTG 
GTGATCACGG AGGATGGGGA GTTTCCCCAA CTCGCGAAGC ACCGCGGCGC ACAAGTGCGC 
AAGGGGCGCT ACTGGGGGCC GTTCGCTTCG GCGTGGTCGG TGAACCAGAC GATCCAGGCG 
CTGCAGCGTG TCTTTTTGCT CCGTACATGC CCCGATACGG TCTTCGCCAA TCGCACGCGG 
CCCTGCCTCC TGTTCCAGAT CAAGCGATGC TCGGCTCCGT GCGTCGGGCG CATCGATGCC 
GAGGCCTATG GGGCGCTGGT CCGCCAGGCG AGTGATTTTC TGTCCGGCCG CGCGGGGACG 
GTGCAGCACG ATCTGGCCGC CGCAATGGCA GCTGCCGCGG ACGTCATGGA ATACGAGCGT 
GCGGCGGCGA TCCGGGATCG CATCCGTGGC CTTGCGCACA TTCGCGGCGG TGACGTGATC 
AACCCCGAAA GTGTTGGCGA TGCCGATGTG ATCGCGATCC ATCAGGCGGC GGGTCAGTCC 
TGTCTTCAGG TCTTCTTCAT CCGAGGCGGG CGGAATTATG GCAACCGGAG TTTTTTTCCC 
ACCCAGGCCC AGGGAGCCAC GCCGGGCGAT GTACTCGGTG CGTTCATTGC CCAGTTTTAT 
GACGACAAGA CACCGCCTCC TCTCATTTTG CTCAGCAACA CCGTCCCCCA GGCCGACCTA 
CTCAAGGATG CGCTTGGTCT CAAGGCAGGG TACAAGGTTG AACTTGCGGT GCCGCAGCGC 
GGTGAGAAGC GCCATGTCGT CGAGCACGCG GCAACCAATG CCCGGGAAGC ACTCGAGCGA 
AAGCTGGCGG AGTCCGCGGG GCAGGAAAAA CTGCTTGCGG CGACGGCCGC TCTGTTCGGT 
CTTGAGGGAA ATCCGGAACG GATCGAGGTT TACGACAACT CTCACATCAT GGGCACCAAT 
GCCTATGGTG TGATGATCGT TGCCGGTCCC GAGGGCTTCA TCAAACCGGC TTATCGGCGC 
TTCTCGATCA AGGGGCCGAT CACGCCGGGC GACGATTTCG CAATGATGCG CGAGGTGCTG 
ACGCGTCGCT TTGTCCGGGC GACGGCCGAA GACTCGTCGC GTGAAGATGG CACCTGGCCG 
GATCTTGTCG TGATAGATGG CGGCGCCGGG CAATTATCGG CGGCGCGCGC GGTACTGGAC 
GAACTCGGGG TAAGCGATGT TCCGCTGGTC GCGATCGCCA AGGGGCCCGA TCGTGACGCG 
GGGCGTGAAT GGTTTCATCT GCCGGACCGT TCTCCCTTTC AACTGCCGCC CCGTGACCCC 
GTGCTTTATT TTCTCCAGAG GTTGCGCGAC GAGGCGCACC GCTATGCGAT CACGACCCAT 
CGAGCGAGTC GCAGCCGCAA AATCACCACG AGTGAGCTAG ATGGCATTCC TGGTATCGGA 
TCGGCGCGAA AGAAGGCCCT GCTCAATCAT TTCGGTTCGG CACGGGGCGT GCGCCAGGCC 
GGATTGAAGG ATCTGGAAGC TGTCTCCGGC ATAAACCGGA CGACGGCCCG ACTGATTTAC 
GGCTATTTCA ACCCGGATGC TCGATTTGAC GATCTTCCCG CAGGAGGAAT CCGGAAAGAT 
TGA 

 

Protein sequence

MISGALVSMP AAPGVYRMLD LSGNALYVGK ARSLKKRVTT YTQIARLPER LRRMVSETST 
VEIITTHTEA EALLLEANLI KRLKPKYNIL LRDDKSYPWL VITEDGEFPQ LAKHRGAQVR 
KGRYWGPFAS AWSVNQTIQA LQRVFLLRTC PDTVFANRTR PCLLFQIKRC SAPCVGRIDA 
EAYGALVRQA SDFLSGRAGT VQHDLAAAMA AAADVMEYER AAAIRDRIRG LAHIRGGDVI 
NPESVGDADV IAIHQAAGQS CLQVFFIRGG RNYGNRSFFP TQAQGATPGD VLGAFIAQFY 
DDKTPPPLIL LSNTVPQADL LKDALGLKAG YKVELAVPQR GEKRHVVEHA ATNAREALER 
KLAESAGQEK LLAATAALFG LEGNPERIEV YDNSHIMGTN AYGVMIVAGP EGFIKPAYRR 
FSIKGPITPG DDFAMMREVL TRRFVRATAE DSSREDGTWP DLVVIDGGAG QLSAARAVLD 
ELGVSDVPLV AIAKGPDRDA GREWFHLPDR SPFQLPPRDP VLYFLQRLRD EAHRYAITTH 
RASRSRKITT SELDGIPGIG SARKKALLNH FGSARGVRQA GLKDLEAVSG INRTTARLIY 
GYFNPDARFD DLPAGGIRKD