| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0336 |
|---|
| Symbol | |
|---|
| ID | 5159804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 385002 |
|---|
| End bp | 385736 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640552254 |
|---|
| Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
|---|
| Protein accession | YP_001233482 |
|---|
| Protein GI | 148259355 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00129504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAG ACACGCAGAC GACGCCTACG GATCTCGCGC AGGGGGCGAC GGCGAGGCGG
GTGAGCGCGC CGGTCTATGT GTACGAGCTG CCGGTGCGGA TCTGGCACTG GGTGATGGCG
CTGTCGATCG TGATTTTGTC GATCACCGGA TTCCTGATCG CCGATCCGCT GTGGCCGTTG
CAGGTCGGCC AGCCGAGCCA GCATTTCCTG ATGGGCGACA TCCGCACGAT CCATTTCATC
ACCGGCGACG TGTTCGCGGT GGCGATGCTG GTGCGGATCT ACTGGGCGAT CGTCGGCAAC
CGGTATGCGC GGGAGATTTT CGCGCCCGCG GTCTGGCGGC GGTCGTGGCG GCGCGAGTTC
GCCAGGACGA TCCGCTGGTA CCTGTTCCTC GAACGCGAGA CGAGCAAGGA GATCGGGCAT
AATCCGCTGG CGCAGCTTGC GATGTTCGCG ATGTTCACGC TCGGCGTGCT GTTCCAGATC
GTCACCGGCT TCGCGCTGTT CGGCGAGGGG ACCGGCCATG GCACCTGGGC CTTTGCGCTG
TTCACGAGCT GGGTGATGCC GCTCTTCGGC AACAGCCAGG CGGTGCACAC GTGGCATCAC
CTGGCGATGT GGTACCTGAT CCTGTTCGCG ATGGTCCATG TCTACATGTC GGTGCGGGAG
GACATCATGT CGCGGCAGAC GATGATCAGC ACGATGATCA ATGGCTGGCG CTTCTTCAAG
GACGACCGGG AATGA
|
|---|
| Protein sequence | MTADTQTTPT DLAQGATARR VSAPVYVYEL PVRIWHWVMA LSIVILSITG FLIADPLWPL
QVGQPSQHFL MGDIRTIHFI TGDVFAVAML VRIYWAIVGN RYAREIFAPA VWRRSWRREF
ARTIRWYLFL ERETSKEIGH NPLAQLAMFA MFTLGVLFQI VTGFALFGEG TGHGTWAFAL
FTSWVMPLFG NSQAVHTWHH LAMWYLILFA MVHVYMSVRE DIMSRQTMIS TMINGWRFFK
DDRE
|
|---|
| |