| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0295 |
|---|
| Symbol | |
|---|
| ID | 5162517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 339218 |
|---|
| End bp | 341617 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640552213 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001233441 |
|---|
| Protein GI | 148259314 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCTTT CCTCCGGCGT TCGTCATACT GATCGAGTCA TGCAGCTTTC GCTCATGGCG
CTTCTGCTGT CCACCAGTTG TCTCATTCCC GCCGCGGCAT ACGCGCAAAC AGTGAGCGCC
GGCGAGGTGA GCGCGTCCAG CGCGCTGTCG CTGCCCGGCG TCACGACCGC GCCGAGCCAG
AAGAAGGTCT TCAAGTCTGG CAATACGACC CGCGTCCTGA ACCGCAAGCT CCTCGAAGCC
GCCGGCCCCG TCGCGGGCGC CGCGCAGATG CTGTCCTATG CCCCCGGCGT GCAGATCACC
GGCTACGGCA ACACCGGCGC GTCCAAATAT ACCGTGACGC TGAATGGCGT GCAGCAGGGC
TGGGGCGGCT TCGGCGGCTT CACTGGCGAC GGCGCCATCG GCGTGACGCT GGACGGTGTT
CCGGTCGTCG ATCCGGGCAG CGATCTCTGG CAGTCGAACA TGATTCCGCA GAGCGGAATG
ATCCAGAGCG TGACAACCAC TTATGGCCCC GGCAACGCCG CCGACCGCTG GTACAACAAC
CTCGCCGGAA CCATCGAGTT CACCCCGGTG CAGCCGACGG CCAAGCCCGG CGGCGACATC
AACCTGACCT ATGGCAGCTA CGGTCAGAAG AACATCGAGT TCGACCTGCG CACCGGCAAC
TATCACGGCT GGTCCACGGT CATTGCCGGC GGCGCCGGCG ACGGCAACAG CTTCCGCAAG
TCGCCGGACG GCTTCCAGAG CCCGTCCAAC GACTATTCGA TCTACCTCAA GACCGTGAAG
AACTTCAGCG CCGGCAATTT CGCCTTCGGC GGTTACTTCG CGCGCAGCGC CGGCTATCGC
GTGCCGGTCA TCCCGACCTC CCCGATCCCG GGCGTCACGA TCAGCGGAAA CGCGGGCGCG
CCGCTCTACA GCCAGCAGAC ATCAGGCTTC TACAGCGCGC CTCCTTACAA CTACTACGAA
AAATTCGATA CCGACGCGCT GTGGATGGTC TTCGCGCGCG AGAACATCGA ACTTGATGAT
TCGACCACGC TGCACAACCT GACCTATTAC GAGAACTTCA CGCGCACGCA TTCGCGCCTG
TATGATTTCG GCAGCGTTGG CCCGCAGCGC TATGAATATA ACAACCCGTA CACGAACGTC
ATCGGCGACA AGCTGTGGCT GACCGAAAAA CTGCCGTTCA ATACCTTGAA TTTCGGCGGC
TACTACATCC ATACGCTCTA TAACAGCCGG AACAATTTCT ATAACACGGT GTTGGGCGGC
AACAAGGGCG TGGTCAATGC CGGCGGCAAG ATCCGGTCAT CCTACTTCAA TGTCGATAAT
TTCGCGATGT TCCTCCAGGA TGACATTCAT CCGGTCAGGG CGCTGCACAT CATCCCCGGC
ATCCGCTTCG TCAGCTTCCA GACCACCTAT TCCGACTCGG CGCTGCAGGA TTTCGCGTTC
GCCCCGGGTG TCGGCCTTTC GACGCATTGC GTGCTGGATG GCAGCACCGC GACCAGCGGA
ACCACGCAGG CGACCGATCA GGGTTCATCC TGCGGATCGC ATGTAAGCCG CAACGGCGTG
GAGCCGTCCA TCTCGGCGAA CCTGCAGGTC ATGCCGTGGA TGGCGCTGTA CGGTTCGTAT
GGCGAGGCGT TGCGCACCCC CAGCGTTGGC GGCGGCGGCG GCCTGTTCCA GAAGATCAAC
CCGACGACCG GCTATCAGCT CGAGCTCGGC CAGTACTACG ACATCGGCGC GAAATTCCAT
GTCGAGAATG GGCGGTTCCT GCATCACTTC GTCGCCGGGG TCGACTATTT CCACCTGCGC
TATGCCAAGC AGTCGCTCAG CACGCAGCTC GCCAACGGCA ACGCCCTGTT CGCCTCCGGA
TCGTCGATCT ACCAGGGCGT GAACATGTTC GCCGACGACA ATCCGCTTTA TAATCTCTAC
GTCTTCGGCA ACGCCTCGTT CATCGATGCG AAATACCAGA CCTACATCAC CGGCGGCACC
TCCTATGGTG GGCGGCATGT GCCGTACGTG CCCTCGGTCA ACTTCAATAT CGGCGCCTAT
TACGACATCC CGATCGGATC GATGCTGCTC GAACCGCGCA TGTGGTATCA GTACACGGGC
AGCCAGTACA TGTTCAACAA CAACACCGGC GCGCCGAGCA ACCGGAAAAT GCCCGGCTAT
GGCACGCTGA ACATGTCCGC CAAGCTCACT GTCCCGGTGA CCCTGCCTTA CGTGGGCCAC
AAGAGCATGG ATGTGTCGCT GACGGCATTG AACATCACGA ACAATCAATA CAATGCCTAC
GAATACATCG GCACGGGCGG CTACTTCAAC TATTCCGGAA CCGTCCCGGC CTCCGGCTTC
ACCTATGCCT ATCCCGGCGC GCCGTTCACC ATCTACGGCA GTGTCGGCTT CCACTTCTGA
|
|---|
| Protein sequence | MRLSSGVRHT DRVMQLSLMA LLLSTSCLIP AAAYAQTVSA GEVSASSALS LPGVTTAPSQ
KKVFKSGNTT RVLNRKLLEA AGPVAGAAQM LSYAPGVQIT GYGNTGASKY TVTLNGVQQG
WGGFGGFTGD GAIGVTLDGV PVVDPGSDLW QSNMIPQSGM IQSVTTTYGP GNAADRWYNN
LAGTIEFTPV QPTAKPGGDI NLTYGSYGQK NIEFDLRTGN YHGWSTVIAG GAGDGNSFRK
SPDGFQSPSN DYSIYLKTVK NFSAGNFAFG GYFARSAGYR VPVIPTSPIP GVTISGNAGA
PLYSQQTSGF YSAPPYNYYE KFDTDALWMV FARENIELDD STTLHNLTYY ENFTRTHSRL
YDFGSVGPQR YEYNNPYTNV IGDKLWLTEK LPFNTLNFGG YYIHTLYNSR NNFYNTVLGG
NKGVVNAGGK IRSSYFNVDN FAMFLQDDIH PVRALHIIPG IRFVSFQTTY SDSALQDFAF
APGVGLSTHC VLDGSTATSG TTQATDQGSS CGSHVSRNGV EPSISANLQV MPWMALYGSY
GEALRTPSVG GGGGLFQKIN PTTGYQLELG QYYDIGAKFH VENGRFLHHF VAGVDYFHLR
YAKQSLSTQL ANGNALFASG SSIYQGVNMF ADDNPLYNLY VFGNASFIDA KYQTYITGGT
SYGGRHVPYV PSVNFNIGAY YDIPIGSMLL EPRMWYQYTG SQYMFNNNTG APSNRKMPGY
GTLNMSAKLT VPVTLPYVGH KSMDVSLTAL NITNNQYNAY EYIGTGGYFN YSGTVPASGF
TYAYPGAPFT IYGSVGFHF
|
|---|
| |