Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0094 |
Symbol | |
ID | 5162236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 104863 |
End bp | 105732 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640552011 |
Product | PaaX family transcriptional regulator |
Protein accession | YP_001233242 |
Protein GI | 148259115 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.339453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCATC ATGTAGCCGC TCTTGTGGCC CGATTGCATG AGCAACCCTC CCATACCGGA TCGCTTATCG TAACGCTGTT CGGGGATGCT CTGCTACCAC GCGGCAGCGC CATTGCTCTC GCTACCATAC TCGACCTGTT CGAGTCCCTT GGCATTGGCC CGGGTGTAAT ACGTACCGCT ATCTCGAGGC TTGCCGCTGA TGGCTGGCTG GTGGCGAGCC GCCGTGGCCG TTCGAGTTAC TACCGGATCG GCCCGTCACG CCGCGGTGAG TTCATCCGCG CCGCGCGACA TATCTACGGT CGGCCTCGTG GCACAGCAGC TCGGAGCCTG ATCATCGCCC TCCCCGAGCC AGGACCGGGC CGGGAACCTG CACGCGAGCG GTTCAACCGA CTCGGCTTTG CCTCATGGCA AGGCATACTG CTCGCTCCGG ACCGGCCGTT GCCACGCTCG CTCGAAGCTG GGAGCATCGT TCTTCGAGCA ACCGGCGGCC CGGAATCACT GCGCCGACTG GCGGCGCGGG CCTGGCGACT GGATGCCTTG TGCGATCACT ACAAGGGATT TCTTGCCATT TTCGGCGGGC TTACGGCCGA CGCCCCGGCT TTCGATCCGC GCGATGCGCT GCTGGCCCGG CTGCTGCTGA TCCATGACTA CCGGCGGATT GTGCTGCGGG ACCCGCGTCT GCCGGCTACT TTCCTACCGG AAGAGTGGGC CGGCGACGGG GCGCGCCGAC TCTGTGCCCA ACTCTACGAG GCGCTACTCG ATGCATCGGA GCTCTGGCTG AGCCATAACG GCGCGACCGA GACAGGCGCG TTACCGACGG CAGATTCAAC TCTGCGCCAT CGTTTCGCGG ACCTGCGCGG GCACGTCTGA
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Protein sequence | MNHHVAALVA RLHEQPSHTG SLIVTLFGDA LLPRGSAIAL ATILDLFESL GIGPGVIRTA ISRLAADGWL VASRRGRSSY YRIGPSRRGE FIRAARHIYG RPRGTAARSL IIALPEPGPG REPARERFNR LGFASWQGIL LAPDRPLPRS LEAGSIVLRA TGGPESLRRL AARAWRLDAL CDHYKGFLAI FGGLTADAPA FDPRDALLAR LLLIHDYRRI VLRDPRLPAT FLPEEWAGDG ARRLCAQLYE ALLDASELWL SHNGATETGA LPTADSTLRH RFADLRGHV
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