| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0082 |
|---|
| Symbol | |
|---|
| ID | 5161983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 88570 |
|---|
| End bp | 89400 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640551998 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001233230 |
|---|
| Protein GI | 148259103 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGC GCGACTCTCA CGGAAAGGCC GGCAACGGCG GCCGCCACAA ACTTCCTCGC
GGCCCGCATC CTCACAGGCG GCCACAAGGC GATGCGCCGC GTGACCGGCG ACCTGCATCA
TCCGCCGGTG GGCTTTGGCT CTATGGATTG CATTCCGTCG AGGCGGCGCT TGCGAATCCC
GCCCGCAGGC TGCGCCGCCT CGTTGTTACC GAGGAAGGCG AAGCCGCACT CGCCGGGCGC
CTGCCGCATC CATGGCCGAT TCAACCCGAG CGGATCGAGC GCGATCGACT CGACCAGATG
CTTGGCCGCG GTATCGTGCA TCAGGGCGTT GCCCTGCAGG CCGATCCCCT GGTGCCGCCA
TCGCTGAACG ACGCACTCAA ACGTCCGGGC CCGGTTCTCG TGCTCGATCA GATCACCGAC
CCGCGCAATG TCGGGGCGAT CCTGCGCTCA GCCCAGGCCT TCGGCGCGGC AATGGTCATT
GCGCAGGAAC GCAATGCCCC AGAGGAGGGC GGTGCACTCG CCAAGGCAGC TTCCGGCGCG
CTGGAACGGA TACCGCTGCT ACGCACAGTG AACATCGCTC GGGCGCTGAT CGCGCTAAAG
GCGGCGGGTC TGTGGGTCAT GGGGCTCGAT GCGGCAGGAT TGTCGCATCT GTCGCGCGAC
GCGATCGGCA ACCGTCGTGC CGCCCTGGTG CTCGGGGCCG AGGGCGAAGG GCTGCGCCGC
CTGACCCGCG AAACCTGCGA CGAACTTGTC TCGCTGCCGA TGCCGGGCGG AATGGAAAGC
CTTAATGTGT CAGCAGCCGC GGCCGTGGCG CTCTACGAAA TCATCCGGTA G
|
|---|
| Protein sequence | MDKRDSHGKA GNGGRHKLPR GPHPHRRPQG DAPRDRRPAS SAGGLWLYGL HSVEAALANP
ARRLRRLVVT EEGEAALAGR LPHPWPIQPE RIERDRLDQM LGRGIVHQGV ALQADPLVPP
SLNDALKRPG PVLVLDQITD PRNVGAILRS AQAFGAAMVI AQERNAPEEG GALAKAASGA
LERIPLLRTV NIARALIALK AAGLWVMGLD AAGLSHLSRD AIGNRRAALV LGAEGEGLRR
LTRETCDELV SLPMPGGMES LNVSAAAAVA LYEIIR
|
|---|
| |