| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0040 |
|---|
| Symbol | |
|---|
| ID | 5162382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 38471 |
|---|
| End bp | 39610 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640551954 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_001233188 |
|---|
| Protein GI | 148259061 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGG TTTATGTCGT CGCCGGTGAA GCAAGCGGCG ACGTGCTGGG TGCGCGGCTG
ATCGCGGCCA TGCGCGCGCG GGCCGGCGGC ATCGAAGTTG CCGGCATCGG CGGCGCGAGG
ATGGCCGAAC AGGGTGTTGC CTCGCTGTTC CCGATGCAGG AACTGGCGCT CATGGGCCTC
GCGGAAGTCC TGCCCAAGCT CTTCCGGCTG CGCCGCCGGC TCGAGCAGAC GGAAGCGGAC
ATTGCCGCGA GGCGGCCGGA CATCGTCGTG ACCATCGACA GTCCGGGCTT CACGCTCCGC
CTGCTCCGGC GAATCGCCCC GCTCGGACTC CGCCGCGTGC ATTACGTCGC CCCCCAGGTC
TGGGCCTGGC GACAGGGGCG GGTAAAGCAC TTCCCCGGCC TGTGGGACCG GCTGCTCTGC
CTCCTGCCCT TCGAGCCGGA TTTCTTTGCA CCGCATGGGC TGAACCCGGT CTTTGTCGGC
CATCCGGTGC TGGAATCGGG TGCCGATGCC GGCGATCCTG CGCGCTTCCG TGCCCGGTTC
GGCCTGGCGG AGTCAGCGCG TTCCCTGATC CTGATGCCTG GCAGCCGCCG CACGGAAACG
GCCCGGCTGA TGCCGGTTTT CGGCGCGACG GTGGAACGCC TCCGCCCACG ATTTCCGGAT
CTCGTGCCGG TGCTGGCCGC GGCGCCGGCA CTCGCCGGCG AGTTGCAGGC GCAGGCGGCC
GCCTGGCCGC GCCCGCCGCT GATCGTCACC AATGTGGCCG AGCGGTATGA CGCCTTCGCC
GGCGCCGAAG CCGCGCTGAC GAAATCCGGC ACCTCGACGC TGGAACTGGC TCTGGCCGGC
GTGCCGATGG CGGTCACCTA CCGGGTCAAT CCGATCAGCG CGATGCTGGC CCGGCGGCTG
ATCAAGGTGC CGCACGTCGC CATGATCAAC CTGCTCGCCG GGCAAGAACT GGTGCCGGAA
CTGTTGCAGG ATGCCTGCAC GCCGGAGCGC CTCTCCGCCG AAATCGCCTC GCTGCTCGGC
GACCCTGAGC GGGCTGCAGC GCAACGGGCC GGCTTCAGCG CTGCCCTATC CACGCTCGCC
ATCGCGGGAT CGGCGTCTCC CAGCGAAGCC GCGGCAACGG CCGTGCTCGA CCTGCTCTGA
|
|---|
| Protein sequence | MTLVYVVAGE ASGDVLGARL IAAMRARAGG IEVAGIGGAR MAEQGVASLF PMQELALMGL
AEVLPKLFRL RRRLEQTEAD IAARRPDIVV TIDSPGFTLR LLRRIAPLGL RRVHYVAPQV
WAWRQGRVKH FPGLWDRLLC LLPFEPDFFA PHGLNPVFVG HPVLESGADA GDPARFRARF
GLAESARSLI LMPGSRRTET ARLMPVFGAT VERLRPRFPD LVPVLAAAPA LAGELQAQAA
AWPRPPLIVT NVAERYDAFA GAEAALTKSG TSTLELALAG VPMAVTYRVN PISAMLARRL
IKVPHVAMIN LLAGQELVPE LLQDACTPER LSAEIASLLG DPERAAAQRA GFSAALSTLA
IAGSASPSEA AATAVLDLL
|
|---|
| |