Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0034 |
Symbol | |
ID | 5161386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 31136 |
End bp | 32365 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640551948 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001233182 |
Protein GI | 148259055 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAAC AGCCATCCGC TGGAACCGTG TCGCCCTCGG GCCCGCTCGC CGGACTGACG GTATTCGATC TGACGCGAGT GCTCGCCGGT CCCACCTGCG TGCAGATGCT GGCCGATCTC GGGGCCGAGG TGATCAAGAT CGAGAAGCCG GGCAGCGGCG ACGATACCCG TGGATTCGCG CCTCCCGCGC TGCCGGGCAC CGAGCAGAGC GCCTATTTCG CCGGCGCCAA TCGCAACAAA CGGTCCGTGA CGCTCGATAT CGCGAAGCCC GAGGGCCAGA AACTGGCGCG CGCGCTGATC GCGAAGAGCG ATATCCTGGT CGAGAACTTC AAGGTCGGCA CGCTGCCGCG CTACGGCCTC GGCTATAACG ATCTCAGGGC CGACAATCCG GGGCTGATCT ATTGCTCGAT CACCGGATTC GGCCAGACCG GCCCCTATGC GTCCCGCCCC GGCTACGACA GCCTGATCCA GGCCATGGGT GGCATCATGT CGCTTACCGG CGTGCCGGAT GGCCAGCCGA TGAAGGTGGG CGTGCCGGTC GCCGACCTTT TTGCCGGGCT CTACGGCGCG ATCGGCGTGC TCGCCGCGCT GCGCCACCGG GAAATCACCG GGCAGGGCCA GCACATCGAT ATCGGCATGC TGGACACGCA TGTCGCCTGG CTCGCAAATC AGGGCATGAA CTACCTCGCC ACCGGCAAGA ATCCCCCGCG CCTCGGCAAT GAGCACCCGA ATATCGTTCC CTATCAGGTT TTCGCGACCG AAGACGGCCA TATCGTCCTC TCGATCGGTA ACGACCCGAC CTTCGCGCGT TTCTGCAACG CGTTCGGACT GGAGCATCTG CTGGCTGACG AGCGGTTCGC CACGAATGCC GCCCGCGTCG CCAATCGCGC ATTTGTGACC GACACCCTCA CTGCGGTTCT GGCGCGGCAT CCGTCCGCCT GGTGGCTGGA ACGGCTGGAA GAGCTGAAGA TCGGCTGCGG CCCGATCAAC ACGCTGGAGC AGGTCTTCGC CGATCCGCAC GTGATCGCGC GCGGCAACCT GATCGAAATG ACCAGAAGCG ATGGCGTGCC GGTGAAGCTC GTCGCCAATC CGGTCCGCCT GTCGGAAACG CCGGTGGATT ATCGCCTCGC ACCTCCCATG TTGGGAGAGC ATACCGACGA GGTGCTGACC AACATGCTGG GACTCGACGA ACCGGCCCGC GCCGCGCTGC GCCGGGACGG CATCATCTGA
|
Protein sequence | MSEQPSAGTV SPSGPLAGLT VFDLTRVLAG PTCVQMLADL GAEVIKIEKP GSGDDTRGFA PPALPGTEQS AYFAGANRNK RSVTLDIAKP EGQKLARALI AKSDILVENF KVGTLPRYGL GYNDLRADNP GLIYCSITGF GQTGPYASRP GYDSLIQAMG GIMSLTGVPD GQPMKVGVPV ADLFAGLYGA IGVLAALRHR EITGQGQHID IGMLDTHVAW LANQGMNYLA TGKNPPRLGN EHPNIVPYQV FATEDGHIVL SIGNDPTFAR FCNAFGLEHL LADERFATNA ARVANRAFVT DTLTAVLARH PSAWWLERLE ELKIGCGPIN TLEQVFADPH VIARGNLIEM TRSDGVPVKL VANPVRLSET PVDYRLAPPM LGEHTDEVLT NMLGLDEPAR AALRRDGII
|
| |