| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0023 |
|---|
| Symbol | |
|---|
| ID | 5159739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 19977 |
|---|
| End bp | 21551 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640551937 |
|---|
| Product | heparinase II/III family protein |
|---|
| Protein accession | YP_001233171 |
|---|
| Protein GI | 148259044 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGCG CGAGACAATG GGTTGCCCGG CTCGCCGCCC TCCGCGGTGG CAACGTTCCC
GATGCCCCTT CGGTCGCCCT GCGAGATCCC TGGCCCGGCG AGCCTGCCCG CGGCGCGCGC
ATCATCAAGG GGGAAATCGA ATACCAGAAC GTCGTACGGC CGCTCCGGCC CGGCCTCTTT
CACGAGAACG ACGGCTCGCC GGTTTTCATC GCCCATATCC AGGGTTTCGT GTGGCTGCGC
GATTTGCGGG CGCTCGGCAC CGACGCTGCC CGCAGCCGCG CGCGGGCCCT GATCGCCGAC
TGGATCGATT GTGAAGCCCT CCCGCCGGTG GCCTCGGCCC CCGAGGTTTC CGGCGCGCGC
ATCGCGGCGT GGCTCGGCCA TTACGATTTC TTCGCCGCCT CGGCGGATGA CGACTTCCGG
CAGATGCTGA TGGCCCGCCT CGTCGCCGAT GCGAGGATGC TCTCGGCTAA CCTCCCCGCC
GAGGTGCGCG ACGGCCGTGC CTTCACCGCG ATCAAGGGAC TGATCGCCGC GGCGGTCGCG
CTGCCCGAGC ACGGAGCGTT CATGCAGCGG GCCCTGCGCT TCCTCGTGCC GGAGATCGAG
CGGCAGATCC TGCCCGACGG CGCGCATGTC GAGCGCAGCC CCGCCGCCCA CTTTGCCGTG
CTGCAGGACC TGACCGAAAT CCGCGCCTTG CTGCAACTTG CGCGCGCCGA AGTGCCGCCG
CAGCTTCCCG GCGCCATCGA GCGGATGGCG GTCGGGCTGC GGGCGCTGCG GCATGGCGAT
GGCGGCCTCG CCCTCTTCAA CGGCACCAGC GAGGACTGGC CCAACCTGAT CGACCTCGTG
CTGAGCCAGG CCGGGCGCAC CGGCCGCAGC GCCTCGGCCC TGGCCGGCGT GGGGTTTCAC
CGGCTTGCCG CCGGCCGGTC ACTCGTCCTT GTCGATGCGG GGCCGCCGCC GGGGCCGGGC
GTCGACCGCT TTGCCCATGC AGGCACGCTC TCCTTCGAAT TCTCGGTCGG GCGCGACCGG
CTGATCGTGA ATTGCGGCGC CGCCCCCGCG GCGTCGGGCG AGTGGCGCGA CGCCCTGCGC
AACACCGCCG CCCATTCGAC GCTCGTCGTC GCCGACGTGT CCTCGTCCGA ATTGCGTGAC
GAGGGACTCG GCCGCCGTCC CGCCCATGTC GAGGTGCAGC GCCAGGAGGC GAACGGCGCC
CACTGGCTGG AGGCGAGCCA TGACGGCTGG CAGAAACTGT TCGGCGCGGT GCATCGCCGC
CGCCTCTATC TCGCGGAGAG CGGCGAGGAT CTGCGCGGCG AGGACAGTAT CGAGGCCGAC
CAGCCGCAGC CCTTCACCCT GCGCTTTCAC CTGCACCCGA ACGTGACGGC GAGCATCCAG
CAGGACGGGG AGGGGGCATT GTTGCGCCTG TCCTCGGGCC AGGGCTGGCG CCTGCGTGCC
GGCGGCGCCA CGCTGAGCAT CGAGGACAGC ATCTATTTCG GCGGACCCGA GCCGCGCCGC
GCCGAGCAGA TCGTGCTGAC CGGAACGCCC GACGGTCCGC AACAGGTGAA ATGGGCGCTG
ACCAGGATGG GCTGA
|
|---|
| Protein sequence | MRGARQWVAR LAALRGGNVP DAPSVALRDP WPGEPARGAR IIKGEIEYQN VVRPLRPGLF
HENDGSPVFI AHIQGFVWLR DLRALGTDAA RSRARALIAD WIDCEALPPV ASAPEVSGAR
IAAWLGHYDF FAASADDDFR QMLMARLVAD ARMLSANLPA EVRDGRAFTA IKGLIAAAVA
LPEHGAFMQR ALRFLVPEIE RQILPDGAHV ERSPAAHFAV LQDLTEIRAL LQLARAEVPP
QLPGAIERMA VGLRALRHGD GGLALFNGTS EDWPNLIDLV LSQAGRTGRS ASALAGVGFH
RLAAGRSLVL VDAGPPPGPG VDRFAHAGTL SFEFSVGRDR LIVNCGAAPA ASGEWRDALR
NTAAHSTLVV ADVSSSELRD EGLGRRPAHV EVQRQEANGA HWLEASHDGW QKLFGAVHRR
RLYLAESGED LRGEDSIEAD QPQPFTLRFH LHPNVTASIQ QDGEGALLRL SSGQGWRLRA
GGATLSIEDS IYFGGPEPRR AEQIVLTGTP DGPQQVKWAL TRMG
|
|---|
| |