Gene Acry_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0022 
Symbol 
ID5159738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp19292 
End bp19963 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID640551936 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001233170 
Protein GI148259043 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAA TGTCCCGCCC GTCGCCGATC ATCGCCCCCA GCCTGCTTGC CGCCGATTTC 
GGACGCCTTC GCGAAGAGGT CGCCGCGGTG GAGCGTGCCG GGGCGCACTG GCTTCATCTC 
GACGTGATGG ACGGCCATTT CGTGCCGAAC ATCAGTTTCG GCGCGCTGGT TCTCAATGCG 
CTCCGTCCGC ACACGCGCCT CGCCTTCGAC GTTCACCTGA TGATCGCCCC GGCCGATCCG 
TATCTGGCCG ATTTCGCGAA GGCCGGCGCG GATCACATCA CTGTCCATGC CGAGGCCGGG 
CCGCATTTGC ACCGCTCGCT GCAGACGATC CGCGCCCTCG GCCTGAAGGC CGGCGTCGCC 
ATCAACCCCG CGACCCCGGC CGAGGCGGTG CGGCATGTGC TCGACCTCGT CGACATCGTC 
AACGTGATGA CCGTCAATCC CGGCTTCGGC GGCCAGTCGT TCCTCGCGGG CCAGTTGCCC 
AAGATCGCCG AACTGCGCCG CATGGTCACT GAAGCCGGGC GCGACATCCG CATCGAGACG 
GATGGCGGCA TCGATGCCGC CTCGGCGCCT CGCGCGCTCG AAGCGGGCGC CGATGTCCTC 
ATTGCCGGCA GCGCGATCTT CGGCAAGCCG GACTATGCCG CGGCCATCGC CGCGCTAGGA 
ACGGGCGATT GA
 
Protein sequence
MSAMSRPSPI IAPSLLAADF GRLREEVAAV ERAGAHWLHL DVMDGHFVPN ISFGALVLNA 
LRPHTRLAFD VHLMIAPADP YLADFAKAGA DHITVHAEAG PHLHRSLQTI RALGLKAGVA 
INPATPAEAV RHVLDLVDIV NVMTVNPGFG GQSFLAGQLP KIAELRRMVT EAGRDIRIET 
DGGIDAASAP RALEAGADVL IAGSAIFGKP DYAAAIAALG TGD