Gene Acry_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0012 
Symbol 
ID5159816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp12360 
End bp12881 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID640551926 
ProductTspO and MBR like protein 
Protein accessionYP_001233160 
Protein GI148259033 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGTCT TCCGCCTGCC CGAACGCCCC GAACAGCACC GTACCTCCGG CGCCCAGATC 
CTGGCGCTGC TGGGGTTTCT CGCGCTGGCG CTTCTGGTTG GTGCGGTCGG CGGCACGGCC
ACAGTGCCCA ATGTGCACAG CTGGTACGAT GTCCTGCCGC ATCCCCCGGG CACGCCACCC
GATTGGGTGT TCGGCCCGGT ATGGACGCTG CTCTACATCG CCATGGCGGT CGCCGCCTGG
CTGATCTGGC GTGGCCCGGA CATCCTGACC CGCCAGCGTC GCGCACTACG TCTCTGGGGC
TGGCAGCTTG CCGCCAACGC GCTCTGGTCG CCCGTCTTTT TCGCCCTTCA TCGGCCGGAT
ATCTCGTTTT TCGTAATACT CGTGCTCGAC GGCCTGATCG TCATGACCAT TGCCGTCTTT
CGTCCGGTCA GCCGAATTGC CGCCGCATTG ATGGTGCCCT ATCTCGCCTG GTGTCTGTAT
GCGACCTATC TGAACGCCGG CTTCTGGTTT CTCAACCGAT GA
 
Protein sequence
MRVFRLPERP EQHRTSGAQI LALLGFLALA LLVGAVGGTA TVPNVHSWYD VLPHPPGTPP 
DWVFGPVWTL LYIAMAVAAW LIWRGPDILT RQRRALRLWG WQLAANALWS PVFFALHRPD
ISFFVILVLD GLIVMTIAVF RPVSRIAAAL MVPYLAWCLY ATYLNAGFWF LNR