Gene Gura_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_4378 
Symbol 
ID5167018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp5071719 
End bp5074040 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content49% 
IMG OID640551860 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001233094 
Protein GI148266388 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAA AGGAATTAAT CAACAAAAAA ACGAACGGTG AACTTTATTA TGAACTTGCC 
TCCCTTTCAT CGTTCAAGGA TGCCAGCGGC AGCATCAGCA ATTTTGTCGC GGTTAAGGAA
GATATTACTG AACGGAAACG GATGGAGGAG CGTCTGCAGT TTTTGGCATC AATTGTTGAG
AGTTCGGATG ATGCAATCAT AGGGGAAACC TTGGATGGCT TTATTACGAG CTGGAATTGG
GGCGCGGAGA AAATATACGG CTATACCTCC GAGGAAATCA ATGGAAGGCA TTTCTCCACG
CTAATTCCCC CTGATCATCT TGGGGAGGTT ATGCAGATTA TCACCAAGAT CAAGAGTGGC
GGTCACGTAA ATAGCCTTGA AACAGTGCGG ATGACGAAGG CTGGCAGGCA AATCCATGTC
TCCCTGACCT TTTCTCCGAT CATTGATTCA ACAGGAAAAG TTACAGGCGT TTCAGTGATC
GCCCATGACA TTACCGAACG AAAGAAGGCA GAAAAGGCGT TACAAGAGAG CGAAGAGCGG
CTTCGGCGGG CTCATGATGA GTTGGAAATG CGGGTTGCGG AGCGGACGGC GCAACTTGAA
AAAAAACAGA AGGAACTGGA GATGCAGAAC CGGAAGTTGC GGGAAATGCA TCAAGAACTG
GAAACTTCCC TTGACCGGTA CTGGGACTTA TACAACTTTG CTCCGCTCAG TTATGTTACC
CTTGACGATA AGGGGGTAAT TCAGGATGTA AATCTGACCG GTGCGAGATT ATTGGGGATT
GACCGGAATC ACCTGATCGG CATGCCGTTT ATATGCTGTG TGAATAGTGG AGACACGCAG
ACATTTCTGA ATCACATTCA GCGGCACAAT CATATCGAAG AGGAAGTTGT GTCGGAGTTA
GGCATTACGA TACAGGGGGG TAAAACGCTT CAGGCGCAGT TGTACAGCGT TCCGGTTCAA
TATGCCACAG GGCAGACCGT CTATCGAACT GCGATTACCG ACATTACCAA GCGTAAGCTT
ACCGAAGAAA AGTTGCTGCG CCTGAACAGG CTCTACGCAG TGTTGTGCGA GACCAACCAG
GCAATCGTGC GATCCGTCGA CCGTGAATCC TTATTTCATG AAATCTGCCG GGTCACCGTA
GAGCATGGAG GTTTCCAGTT GGCTTGGATA GGACTTCTTG ACGAAGAATC CGATGTGATA
AAACCGGTTA CGTGGAGCGG CACCAATGAA GGCTTCATTG ACGACATACG GATTCCCGCC
AAGGAAGAGC CAAAATCAAC GAGACCGGTC GGTTCAGCCG TTCGAGAAGG GACTATCGTT
ATCAGCAACG ACTTGATAAA CGATACACGC GCTATTCCTT GGCAGAAAGA AGCAATGAAG
CGCGGCTTCA ACTCTTCGGC ATCAATCTCT TTTAAATTAA ACGGAAAGGC TGTCGGGGTC
TTAAACATAT ATTCCGACGA GAAAGACTTT TTTAGCTGGC AATTCGTTGA ACTGCTGCAA
CAGATGGCAA CGGACATCTC CTTCGCCCTC GACAATATTG ATCGAGAGGC CCGTCGCCGG
AAGGCGGAAC ACTCTTTGCG GGAGGAAACG GCCGAGCGTT TGCGGGCCAT GGAGGCTCTG
CGCAAAAAAG ACCAGTTGCT CATGCAGCAG AACCGCCAGG CGGCCATGGG GGAGATGATC
GGCAATATCG CCCACCAGTG GCGACAGCCG TTAAATACAC TGGGACTCAT GCTCCAGCAA
ATGCAGGTTT TTTATGATGT CGGCAAGTTC AGCAAGGATT ATTTCGACGA CAGTGTCAAA
AAGTCCATGG AGATAATCAG GCATATGTCC CAGACAATTG ACGACTTCAG GAATTTCTTC
AAACCAGACA AGGAATACGT TGAGTTCGAA GTGCTGGAGG TAGTTACAAA AACACTGTCT
CTCATCGAAG GGAGTTTTAA CGACCAACGG ATCAAGATCG AAGTTAATCT GTCAGATGAT
CCGATCATCA ATGGCCATCC GAACGAGTAC GCCCAGGTTC TCCTTAACAT ACTGGTCAAT
GCCAGAGATG CACTTTCCGA GGCGAAAGTC GCCGACCCGA GGGTTACGAT CACCATCTGC
CGGGAAAACG ACAAGGCTGT CGTGACCATT AACGACAACG CCGGCGGGGT TTCCGAGGAC
ATAATGGACA AGATTTTCGA TCCCTACTTT ACCACCAAAG GGCCGGACAA GGGGACGGGA
GTCGGGCTGT TCATGTCGAA AACCATAATT GAGAAAAACA TGAAAGGACG GCTTACCGCA
CGCAATTTCG ACGGCGGAGC CGAATTTCGG ATAGAGGTCT GA
 
Protein sequence
MFEKELINKK TNGELYYELA SLSSFKDASG SISNFVAVKE DITERKRMEE RLQFLASIVE 
SSDDAIIGET LDGFITSWNW GAEKIYGYTS EEINGRHFST LIPPDHLGEV MQIITKIKSG
GHVNSLETVR MTKAGRQIHV SLTFSPIIDS TGKVTGVSVI AHDITERKKA EKALQESEER
LRRAHDELEM RVAERTAQLE KKQKELEMQN RKLREMHQEL ETSLDRYWDL YNFAPLSYVT
LDDKGVIQDV NLTGARLLGI DRNHLIGMPF ICCVNSGDTQ TFLNHIQRHN HIEEEVVSEL
GITIQGGKTL QAQLYSVPVQ YATGQTVYRT AITDITKRKL TEEKLLRLNR LYAVLCETNQ
AIVRSVDRES LFHEICRVTV EHGGFQLAWI GLLDEESDVI KPVTWSGTNE GFIDDIRIPA
KEEPKSTRPV GSAVREGTIV ISNDLINDTR AIPWQKEAMK RGFNSSASIS FKLNGKAVGV
LNIYSDEKDF FSWQFVELLQ QMATDISFAL DNIDREARRR KAEHSLREET AERLRAMEAL
RKKDQLLMQQ NRQAAMGEMI GNIAHQWRQP LNTLGLMLQQ MQVFYDVGKF SKDYFDDSVK
KSMEIIRHMS QTIDDFRNFF KPDKEYVEFE VLEVVTKTLS LIEGSFNDQR IKIEVNLSDD
PIINGHPNEY AQVLLNILVN ARDALSEAKV ADPRVTITIC RENDKAVVTI NDNAGGVSED
IMDKIFDPYF TTKGPDKGTG VGLFMSKTII EKNMKGRLTA RNFDGGAEFR IEV