| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4377 |
|---|
| Symbol | |
|---|
| ID | 5167017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 5069807 |
|---|
| End bp | 5071717 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640551859 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001233093 |
|---|
| Protein GI | 148266387 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCAT ATACCCTTGG TACATCAGAG GTTTCGATCC TCTATGTGGA AGACGATCCG
ATTACCAGGG ATCTCATATG CACGATGATC CCCGTTAAAT TTCCGGGGTT GAACCTTTTA
GCTGCTGAAA ATGGTCAGAT CGGCCTGGCG TTGTACAAAG AGCACCGGCC GGATATCGTC
CTTACCGATA TAAGCATGCC GGTCATGGAC GGGATCCGCT TGGCGAGTGA AATTCGGGTG
CTGAACCCCG ATGCCAGCAT TATCGTCATT ACCGCTCACA GCGATACGCG CTACCTGCTG
AATGCCATAG ATATAGGCAT CAACCGGTAT GTGCTGAAGC CGATTGACCA AGAAAAGCTT
TTTGAGGCCA TAGAAGATTG TGTTGCCCGG ATCACTCTGG AAAGACATGT CCGGAAACAG
AGTGAATACA TCTGCAAGCT TACCCGCGCA GTCGAACAGA GTCCCTGCAT GGTCATTATA
ACCGATGCGA AAGGCGTGGT AGAGTATGTT AATCCCAAAT TTACGGAGAT TACCGGTTAC
CTCCCTGAAG AAGTTATCGG AAAAACCCCC AGAATTCCGA AATTGAACGC AAGAGAATCG
GATACTTATG AAAAGCTCTG GAGCACGATA ACCGCCGGCT ACGAGTGGCA AGGCGAATTT
CAGAGCCGGA AAAAGAGCGG AGAACTTTAC TGGGAGTCGG CATCCATCTC TCCCCTATTC
GATGCGGAAG GGGTCATTAC CAACTACGTG GCGGTGAAGG AAGACATTTC CGAACGAAAA
AGAGCAGATA ACGCTCTCAA GGAAAGCGAA GAACGTTACC GGCATCTTTA TGAAGATACG
CCGGTCATGC TGCATTCCAT AGACGGAGTC GGGCGCATAG TGAATGTCAG TAATTATTGG
TTGTTCCACC TGGGCTACGA ACGAAACGAG GTGATCGGAC GAAAATCGAC GGAATTCTTG
ACCGAGGAGT CAAGCCGCTA TGCCGAAGAG ATTGTTATTC CAGCATTTTT CAGGTCCGGC
CATTGCCAGG ATATCCCGTA TCAGATGATG AAAAAGAACG GAGAGATAGT TGACGTGCTT
CTCACCGCCG TGGCCGAATG GAACGCCACC GGCGAGGTGA TCCGTTCCCA GGCGGTCATG
GTTGATGTGA CCGAGCAGAA GAGGGCAGAG GAGCAAATTC GCATACTCAA TGCAGACCTG
GAAAAGCGAG TCCTGGAGCG GACTGCGGAG TTGGAAAACT CAAACAAAGA GCTGGAAGCG
TTCTGTTATG CAATATCCCA TGAGCTGCGA GCGCCAATTG CCAGATTGGA GGGCTTCAGG
GAGGTTATTT TCGAATGCTT CAAGAGCGGG GATTATGGCG ATTTGCAATA TTACGTAGGA
CGCCTTGGTT GCTCGGTCCA GCAGTTGAAG TCAGCAGTCG ATGCGCTTCT CATGATGAAT
CGGCTGTCCA AGACCGAAAT CACATCGGAG CCGATAAACC TTAGCGAACT TTCCCGACAG
GTGATGGCTG AATTGATTGA GGTCCATGGC GAGCGAACCA TGCAATTCCG CGTTGCCCCG
GACGTATTCG CGCGTGGCGA CCGTAAGCTT CTCAACATCT GCATGCATAA CCTGCTTGGA
AACGCCTACA AATACACCTT AAAAAAGCCG CTGGCATCGA TAGAGTTCGG TGCGGAAAGC
CGCGCGGATC AAAAAGTGTA TTTTGTGAGG GACAATGGGG CAGGTTTTGA TATGGCGTAT
GTCAGCAAGT TGTTTCAGCC GTTTTCCCGT CTGCACAGCG AAAAAGAATT CAAAGGCACT
GGAATCGGCC TGGCAACGGT GCATCGTATA ATTGAAAAGC ACGAAGGAAA AATCTGGGCG
GAATCCAAGG TTGACGAAGG TGCTACGATC TTTTTTACCT TGGGCCAATA A
|
|---|
| Protein sequence | MEPYTLGTSE VSILYVEDDP ITRDLICTMI PVKFPGLNLL AAENGQIGLA LYKEHRPDIV
LTDISMPVMD GIRLASEIRV LNPDASIIVI TAHSDTRYLL NAIDIGINRY VLKPIDQEKL
FEAIEDCVAR ITLERHVRKQ SEYICKLTRA VEQSPCMVII TDAKGVVEYV NPKFTEITGY
LPEEVIGKTP RIPKLNARES DTYEKLWSTI TAGYEWQGEF QSRKKSGELY WESASISPLF
DAEGVITNYV AVKEDISERK RADNALKESE ERYRHLYEDT PVMLHSIDGV GRIVNVSNYW
LFHLGYERNE VIGRKSTEFL TEESSRYAEE IVIPAFFRSG HCQDIPYQMM KKNGEIVDVL
LTAVAEWNAT GEVIRSQAVM VDVTEQKRAE EQIRILNADL EKRVLERTAE LENSNKELEA
FCYAISHELR APIARLEGFR EVIFECFKSG DYGDLQYYVG RLGCSVQQLK SAVDALLMMN
RLSKTEITSE PINLSELSRQ VMAELIEVHG ERTMQFRVAP DVFARGDRKL LNICMHNLLG
NAYKYTLKKP LASIEFGAES RADQKVYFVR DNGAGFDMAY VSKLFQPFSR LHSEKEFKGT
GIGLATVHRI IEKHEGKIWA ESKVDEGATI FFTLGQ
|
|---|
| |